Sequence 1: | NP_001246964.1 | Gene: | Rtnl2 / 40903 | FlyBaseID: | FBgn0015831 | Length: | 255 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021333122.1 | Gene: | rtn3 / 394047 | ZFINID: | ZDB-GENE-030710-5 | Length: | 1116 | Species: | Danio rerio |
Alignment Length: | 203 | Identity: | 58/203 - (28%) |
---|---|---|---|
Similarity: | 100/203 - (49%) | Gaps: | 40/203 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 MDLKNLLLWRNSRKTLIVFTGILLLLLDVMVHSVISVISMVGITVLIAAIGHRL---LVQFWSIW 78
Fly 79 KKDENKDQILRFYPHP-------KIEIPREETLYLAGKAVSHINLILNRMIELLLVEKWEDSLKF 136
Fly 137 LVLLCGINLLGDCFNGLTLLIFGHLFIFTVPKLYESYKP----FVDVQIRKF------------- 184
Fly 185 --RKCKID 190 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rtnl2 | NP_001246964.1 | Reticulon | 21..183 | CDD:280592 | 55/175 (31%) |
rtn3 | XP_021333122.1 | XPG_I | <416..>853 | CDD:331126 | |
Reticulon | 927..1091 | CDD:308200 | 55/174 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170592799 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 86 | 1.000 | Inparanoid score | I5136 |
OMA | 1 | 1.010 | - | - | QHG50177 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000492 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.900 |