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Protein Alignment Rtnl2 and Rtn3
DIOPT Version :9
Sequence 1: | NP_001246964.1 |
Gene: | Rtnl2 / 40903 |
FlyBaseID: | FBgn0015831 |
Length: | 255 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006230711.1 |
Gene: | Rtn3 / 140945 |
RGDID: | 620988 |
Length: | 959 |
Species: | Rattus norvegicus |
Alignment Length: | 190 |
Identity: | 66/190 - (34%) |
Similarity: | 99/190 - (52%) |
Gaps: | 16/190 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 NLLLWRNSRKTLIVFTGILLLLLDVMVHSVISVISMVGITVLIAAIGHRL---LVQFWSIWKKDE 82
:|:.||:.:||..||...|::||.:...|||||:|.:.:.:|...|..|: ::| ::.|.:|
Rat 773 DLIFWRDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQ--AVQKSEE 835
Fly 83 NKDQILRFYPHPKIEIPREETLYLAGKAVSHINLILNRMIELLLVEKWEDSLKFLVLLCGINLLG 147
... .:.|....|.:..|........|:.|:|..|..:|.|.|||...||||..|.:..:..:|
Rat 836 GHP--FKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVG 898
Fly 148 DCFNGLTLLIFGHLFIFTVPKLYESYKPFVD--VQIRKFRKCKIDKSNVEKPICIQKECP 205
..|||:||||...|.:|:||.:||.||..:| |.|.:.: .||.||| ||.:.|
Rat 899 AVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQ----TKSIVEK---IQAKLP 951
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166351058 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1792 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000492 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.740 |
|
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