DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rtnl2 and rtn2

DIOPT Version :10

Sequence 1:NP_524263.2 Gene:Rtnl2 / 40903 FlyBaseID:FBgn0015831 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001107739.1 Gene:rtn2 / 100135745 XenbaseID:XB-GENE-941644 Length:321 Species:Xenopus tropicalis


Alignment Length:202 Identity:57/202 - (28%)
Similarity:102/202 - (50%) Gaps:10/202 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KAKDSSQIFMDLKNLLLWRNSRKTLIVFTGILLLLLDVMVHSVISVISMVGITVLIAAIGHRLLV 72
            |.:...::|..:|:||.||:...:....||:.|.||.:...|||||.:...:.:|...:..||..
 Frog   123 KPQPQLEVFRAVKDLLYWRDILLSAGCLTGVTLSLLCLSQFSVISVFAYGCLIILSVTLTLRLYT 187

  Fly    73 QFWSIWKKDENKDQILRFYPHPKIEIPREETLYLAGKAVSHINLILNRMIELLLVEKWEDSLKFL 137
            :.....|:. |.....::|....:::..::...:..:.:|.::..:..:..|.|||:.:||||||
 Frog   188 KLLHALKRG-NGANPFQYYLDADLKLTTKQAEEITARVLSLLSTTICTLRSLFLVEELKDSLKFL 251

  Fly   138 VLLCGINLLGDCFNGLTLLIFGHLFIFTVPKLYESYKPFVDVQI-------RKFRKCKIDKSNVE 195
            |::..:..:|..|||:|:|:...:..||.|.||:.::..||..:       ..||. || :..|:
 Frog   252 VIIYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSKKXNAFRS-KI-QGTVK 314

  Fly   196 KPICIQK 202
            ||...||
 Frog   315 KPPAKQK 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rtnl2NP_524263.2 Reticulon 21..184 CDD:460562 45/169 (27%)
rtn2NP_001107739.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..85
Reticulon 134..298 CDD:460562 46/164 (28%)
Blue background indicates that the domain is not in the aligned region.

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