DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc84D and CDC34

DIOPT Version :9

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_005259747.1 Gene:CDC34 / 997 HGNCID:1734 Length:269 Species:Homo sapiens


Alignment Length:156 Identity:41/156 - (26%)
Similarity:69/156 - (44%) Gaps:14/156 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AATRRLTRELSDLVEAKMSTLRNIESSDESLLMW-TGLLVPEKAPYNKGAFRIEINFPPQYPFMP 65
            ::.:.|..||..|.|..:...|.....:..|..| ..:..|....|..|.|:..:.||..||:.|
Human     8 SSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSP 72

  Fly    66 PKILFKTKIYHPNVDEKGEVCLPI------------ISTDNWKPTTRTEQVLQALVAIVHNPEPE 118
            |...|.||::|||:.|.|:||:.|            :.::.|.||.....:|.:::::::.|...
Human    73 PAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTF 137

  Fly   119 HPLRSDLAEEFVREHKKFMKTAEEFT 144
            .|...| |....|:.|:......|:|
Human   138 SPANVD-ASVMYRKWKESKGKDREYT 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 41/156 (26%)
UBCc 6..149 CDD:214562 41/152 (27%)
CDC34XP_005259747.1 COG5078 6..162 CDD:227410 40/154 (26%)
UBCc 11..162 CDD:238117 40/151 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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