DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc84D and ube2r2

DIOPT Version :9

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001072702.1 Gene:ube2r2 / 780159 XenbaseID:XB-GENE-994678 Length:238 Species:Xenopus tropicalis


Alignment Length:172 Identity:48/172 - (27%)
Similarity:77/172 - (44%) Gaps:24/172 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AATRRLTRELSDLVEAKMSTLRNIESSDES-LLMW-TGLLVPEKAPYNKGAFRIEINFPPQYPFM 64
            ::.:.|..||..|.|..:...| |...||| |..| ..:..|....|..|.|:..|.||..||:.
 Frog     8 SSQKALMLELKSLQEEPVEGFR-ITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYS 71

  Fly    65 PPKILFKTKIYHPNVDEKGEVCLPI------------ISTDNWKPTTRTEQVLQALVAIVHNPEP 117
            ||...|.||::|||:.|.|:||:.|            :.::.|.||.....:|.:::::::.|..
 Frog    72 PPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNT 136

  Fly   118 EHPLRSDLAEEF---------VREHKKFMKTAEEFTKKNAEK 150
            ..|...|.:..|         .:|:.:.::.....||..|||
 Frog   137 FSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 46/170 (27%)
UBCc 6..149 CDD:214562 45/165 (27%)
ube2r2NP_001072702.1 UBCc 11..169 CDD:238117 43/158 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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