DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc84D and ube2nb

DIOPT Version :9

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_956636.1 Gene:ube2nb / 393313 ZFINID:ZDB-GENE-040426-1291 Length:154 Species:Danio rerio


Alignment Length:143 Identity:46/143 - (32%)
Similarity:82/143 - (57%) Gaps:5/143 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLV--PEKAPYNKGAFRIEINFPPQYPFMPPK 67
            ||:.:|...|:...:..::  ...||....:..:::  |:.:|:..|.|::|:..|.:||...||
Zfish     6 RRIIKETQRLLAEPVPGIK--AEPDEGNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPK 68

  Fly    68 ILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVRE 132
            :.|.|||||||||:.|.:||.|:. |.|.|..:...||.::.|::..|.|:.||.:|:||::...
Zfish    69 VRFMTKIYHPNVDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSN 132

  Fly   133 HKKFMKTAEEFTK 145
            ..:.::||..:|:
Zfish   133 EAQAIETARTWTR 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 46/143 (32%)
UBCc 6..149 CDD:214562 45/142 (32%)
ube2nbNP_956636.1 UBCc 4..151 CDD:412187 46/143 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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