DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc84D and CG40045

DIOPT Version :9

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001036640.1 Gene:CG40045 / 3355079 FlyBaseID:FBgn0058045 Length:168 Species:Drosophila melanogaster


Alignment Length:161 Identity:43/161 - (26%)
Similarity:84/161 - (52%) Gaps:21/161 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LTRELSDL----VEAKMSTLRNIESSDESLLMWTGLLV-PEKAPYNKGAFRIEINFPPQYPFMPP 66
            |.::|::|    ||...:.|  |:.:|  :..|..|:: |....|..|.|:..:.||.:||..||
  Fly    10 LKKQLAELNKNPVEGFSAGL--IDEND--IFRWEVLIIGPPDTLYEGGFFKAHLYFPKEYPLRPP 70

  Fly    67 KILFKTKIYHPNVDEKGEVCLPII------------STDNWKPTTRTEQVLQALVAIVHNPEPEH 119
            ::.|.|:|:|||:::.|:||:.|:            :::.|.|....|.:|.::::::.:|..|.
  Fly    71 RMKFVTEIWHPNIEKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDES 135

  Fly   120 PLRSDLAEEFVREHKKFMKTAEEFTKKNAEK 150
            |...|.|:|:...:..|.:......:|:.|:
  Fly   136 PANVDAAKEWRESYTDFKRKVARCVRKSQEE 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 42/159 (26%)
UBCc 6..149 CDD:214562 42/158 (27%)
CG40045NP_001036640.1 UQ_con 10..160 CDD:395127 41/153 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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