DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc84D and CG8188

DIOPT Version :9

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001033852.1 Gene:CG8188 / 32751 FlyBaseID:FBgn0030863 Length:209 Species:Drosophila melanogaster


Alignment Length:148 Identity:41/148 - (27%)
Similarity:72/148 - (48%) Gaps:7/148 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RRLTRELSDLVEAKMSTLR-NIESSDESLLMWTGLLV--PEKAPYNKGAFRIEINFPPQYPFMPP 66
            |::.|||.::.......:: .|..||.:.:.   .|:  |...||..|.||:::.....:|..||
  Fly    17 RQVMRELQEMETTPPEGIKVLINESDVTDIQ---ALIDGPAGTPYAAGIFRVKLTLNKDFPLTPP 78

  Fly    67 KILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVR 131
            |..|.|||:||||...||:|:..:..| |||....:.:|..:..::..|.||..|..:..:..:.
  Fly    79 KAYFLTKIFHPNVAANGEICVNTLKKD-WKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLE 142

  Fly   132 EHKKFMKTAEEFTKKNAE 149
            .:..:.:.|...|:.:|:
  Fly   143 RYDDYSQRARMMTEIHAQ 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 41/148 (28%)
UBCc 6..149 CDD:214562 39/145 (27%)
CG8188NP_001033852.1 COG5078 12..159 CDD:227410 40/145 (28%)
UBCc 16..155 CDD:238117 39/141 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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