DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc84D and Ube2a

DIOPT Version :9

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001013955.1 Gene:Ube2a / 298317 RGDID:1359534 Length:162 Species:Rattus norvegicus


Alignment Length:147 Identity:43/147 - (29%)
Similarity:73/147 - (49%) Gaps:16/147 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ATRRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLV-PEKAPYNK----------GAFRIEIN 56
            |.|||.|:...|.|...:.:.. ..|:.::::|..::. ||..|:..          |.|::.|.
  Rat     5 ARRRLMRDFKRLQEDPPAGVSG-APSENNIMVWNAVIFGPEGTPFEDGTHVETTGQLGTFKLTIE 68

  Fly    57 FPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPL 121
            |..:||..||.:.|.:|::||||...|.:||.|:. :.|.||.....:|.::.:::..|.|..|.
  Rat    69 FTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQ-NRWSPTYDVSSILTSIQSLLDEPNPNSPA 132

  Fly   122 RSDLA---EEFVREHKK 135
            .|..|   :|..||::|
  Rat   133 NSQAAQLYQENKREYEK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 43/147 (29%)
UBCc 6..149 CDD:214562 41/144 (28%)
Ube2aNP_001013955.1 UQ_con 8..155 CDD:395127 41/144 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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