DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc84D and ubc-1

DIOPT Version :9

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001379774.1 Gene:ubc-1 / 177170 WormBaseID:WBGene00006701 Length:192 Species:Caenorhabditis elegans


Alignment Length:144 Identity:38/144 - (26%)
Similarity:76/144 - (52%) Gaps:3/144 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLV-PEKAPYNKGAFRIEINFPPQYPFMPPKI 68
            |||.|:...|.|...:.:....:.| ::|.|..::. |::.|:..|.|::.:.|..:||..||.:
 Worm     7 RRLMRDFKKLQEDPPAGVSGAPTED-NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTV 70

  Fly    69 LFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREH 133
            .|.:|::||||...|.:||.|:. :.|.||.....:|.::.:::..|.|..|..|..|:.:....
 Worm    71 KFISKMFHPNVYADGSICLDILQ-NRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENR 134

  Fly   134 KKFMKTAEEFTKKN 147
            :::.|..::..:::
 Worm   135 REYEKRVQQIVEQS 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 38/144 (26%)
UBCc 6..149 CDD:214562 37/143 (26%)
ubc-1NP_001379774.1 UQ_con 8..145 CDD:395127 37/138 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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