DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc84D and ubc-13

DIOPT Version :9

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_500272.2 Gene:ubc-13 / 177073 WormBaseID:WBGene00006708 Length:151 Species:Caenorhabditis elegans


Alignment Length:147 Identity:49/147 - (33%)
Similarity:86/147 - (58%) Gaps:5/147 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLV--PEKAPYNKGAFRIEINFPPQYPFMPPK 67
            ||:.:|...|:...:..:.  .:.|||...:..:::  |:.:|:..|.|::|:..|.:||...||
 Worm     7 RRIIKETQRLLADPVPGIS--ANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPK 69

  Fly    68 ILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVRE 132
            :.|.|||||||:|:.|.:||.|:. |.|.|..:...||.::.|::..|.||.||.:|:||::...
 Worm    70 VRFMTKIYHPNIDKLGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTN 133

  Fly   133 HKKFMKTAEEFTKKNAE 149
            ..:.:|||:::|...|:
 Worm   134 EAEAIKTAKQWTMNYAQ 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 49/147 (33%)
UBCc 6..149 CDD:214562 47/144 (33%)
ubc-13NP_500272.2 COG5078 1..149 CDD:227410 48/144 (33%)
UBCc 5..149 CDD:294101 48/144 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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