DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubc84D and ubc-18

DIOPT Version :10

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_498541.1 Gene:ubc-18 / 175985 WormBaseID:WBGene00006713 Length:153 Species:Caenorhabditis elegans


Alignment Length:153 Identity:92/153 - (60%)
Similarity:123/153 - (80%) Gaps:0/153 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAATRRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLVPEKAPYNKGAFRIEINFPPQYPFMP 65
            |:|||||.:||.||....:....|:|..:.:||.||.||:|:|.|||||||::.|.||..|||.|
 Worm     1 MSATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLIPDKEPYNKGAFKVGITFPVDYPFKP 65

  Fly    66 PKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFV 130
            ||:.|:||||||||||:|:.||||::.:||||.|:||||:.||:::::.|||.||:|:|:||||.
 Worm    66 PKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQ 130

  Fly   131 REHKKFMKTAEEFTKKNAEKRPE 153
            ::||||||||||.|:|:||||||
 Worm   131 KDHKKFMKTAEEHTRKHAEKRPE 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 UBCc_UBE2L3 3..149 CDD:467421 85/145 (59%)
ubc-18NP_498541.1 UBCc_UBE2L3 3..149 CDD:467421 85/145 (59%)

Return to query results.
Submit another query.