DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ubc84D and ube2c

DIOPT Version :9

Sequence 1:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001095283.1 Gene:ube2c / 100124324 XenbaseID:XB-GENE-971108 Length:179 Species:Xenopus tropicalis


Alignment Length:151 Identity:46/151 - (30%)
Similarity:73/151 - (48%) Gaps:11/151 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RRLTRELSDLVEAKMSTLRNIESSDES--LLMWTGLLVPEKAP-YNKGAFRIEINFPPQYPFMPP 66
            :||.:||..|:   ||..:.|.:..||  |..|.|.:...... |....:::.:.||..||:..|
 Frog    33 KRLQQELMTLM---MSGDKGISAFPESDNLFKWIGTIDGAVGTVYESLRYKLSLEFPSGYPYNAP 94

  Fly    67 KILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVR 131
            .:.|.|..:|||||..|.:||.|:. |.|........:|.:|.:::..|..|.||....||.:..
 Frog    95 TVKFVTPCFHPNVDSHGNICLDILK-DKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQN 158

  Fly   132 E--HKKFMKTAEEFTKKNAEK 150
            :  :||.:.  |::.|:..||
 Frog   159 QTAYKKHLH--EQYQKQVREK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 44/149 (30%)
UBCc 6..149 CDD:214562 44/147 (30%)
ube2cNP_001095283.1 UQ_con 34..170 CDD:365926 43/141 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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