DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mics1 and Ghitm

DIOPT Version :9

Sequence 1:NP_649725.2 Gene:Mics1 / 40898 FlyBaseID:FBgn0037506 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001186051.1 Gene:Ghitm / 66092 MGIID:1913342 Length:346 Species:Mus musculus


Alignment Length:320 Identity:155/320 - (48%)
Similarity:210/320 - (65%) Gaps:7/320 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KSVIPKRNMQELGMRKYSRESRDRDRSQLESRTRGPSLKERMMGPPSENAY---SMGKGAAAGAA 109
            |:.|.|........|:|:.::|.|..   ..:| |..|||..:.|..|..:   .||:...||.|
Mouse    30 KNSITKNQWLVTPSREYATKTRIRTH---RGKT-GQELKEAALEPSMEKIFKIDQMGRWFVAGGA 90

  Fly   110 LMGLVGLCYYGLGLANQPSIYDHSMVWPQYVRDRIHATYAYFGASCGVTAASAVAFFQSDAMMAL 174
            .:||..|||||||::|:....:.:::|||||:||||:||.|...|.|:||.||:|..::.|:|..
Mouse    91 AVGLGALCYYGLGMSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSALAVARTPALMNF 155

  Fly   175 MTRSGWVASLVTLGLVMLSGSIAQGLEYQPGFGAKQLAWLVHCAVLGAVLAPMCLLGGPILTKAL 239
            |....||....|...::.:|.:...:.|:...|.|.|||::|..|:|||:||:.:||||:|.:|.
Mouse   156 MMTGSWVTIGATFAAMIGAGMLVHSISYEQSPGPKHLAWMLHSGVMGAVVAPLTILGGPLLLRAA 220

  Fly   240 LYTSGIVGALSTVAACAPSEKFLHMGGPLAIGLGVVFASSLASMWLPPTTAVGAGLASMSLYGGL 304
            .||:||||.|||||.||||||||:||.||.:|||:||||||.||:||||:..||.|.|:::||||
Mouse   221 WYTAGIVGGLSTVAMCAPSEKFLNMGAPLGVGLGLVFASSLGSMFLPPTSVAGATLYSVAMYGGL 285

  Fly   305 ILFSGFLLYDTQRIVKSAELYPQYSKFPYDPINHALAIYMDALNIFIRIAIILAGDQKRK 364
            :|||.|||||||:::|.||:.|.|....|||||..|.||||.||||:|:|.:||....||
Mouse   286 VLFSMFLLYDTQKVIKRAEITPMYGAQKYDPINSMLTIYMDTLNIFMRVATMLATGSNRK 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mics1NP_649725.2 GHITM 116..364 CDD:198413 132/247 (53%)
GhitmNP_001186051.1 GHITM 82..345 CDD:198413 138/262 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831923
Domainoid 1 1.000 247 1.000 Domainoid score I2151
eggNOG 1 0.900 - - E1_KOG1630
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8667
Inparanoid 1 1.050 307 1.000 Inparanoid score I2601
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52085
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006240
OrthoInspector 1 1.000 - - otm43586
orthoMCL 1 0.900 - - OOG6_105770
Panther 1 1.100 - - O PTHR23291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4521
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.760

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