DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mics1 and ghitm

DIOPT Version :9

Sequence 1:NP_649725.2 Gene:Mics1 / 40898 FlyBaseID:FBgn0037506 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001017195.1 Gene:ghitm / 549949 XenbaseID:XB-GENE-971739 Length:347 Species:Xenopus tropicalis


Alignment Length:335 Identity:160/335 - (47%)
Similarity:215/335 - (64%) Gaps:19/335 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PSLAQGKSVIPK---RNMQELGMRKYSRESRDRDRSQLESRTRGPSLKERMMGPPSENAYSMGKG 103
            |:|..|..|:..   ::.|.|........||.|...:|....| ..|||....|      |||..
 Frog    19 PALTHGSPVLRNSALKSNQWLLQPNQGYSSRSRFGLRLVKSAR-EELKEAAFEP------SMGTA 76

  Fly   104 A---------AAGAALMGLVGLCYYGLGLANQPSIYDHSMVWPQYVRDRIHATYAYFGASCGVTA 159
            |         .||.|::||..|||||||::|:....:.:::||:||::||.:||.||..|.|:||
 Frog    77 ARIDTTGRLIVAGGAVVGLGALCYYGLGMSNEIGAIEKAVIWPEYVKERIRSTYMYFAGSIGLTA 141

  Fly   160 ASAVAFFQSDAMMALMTRSGWVASLVTLGLVMLSGSIAQGLEYQPGFGAKQLAWLVHCAVLGAVL 224
            .||||..::.|:|:||.|..|:|...|...::.:|.:.:.:.|....|||.|||::|..|:|||:
 Frog   142 LSAVAVSRAPALMSLMMRGSWLAIGATFAAMIGAGMLVRSISYDQNPGAKHLAWMLHAGVMGAVV 206

  Fly   225 APMCLLGGPILTKALLYTSGIVGALSTVAACAPSEKFLHMGGPLAIGLGVVFASSLASMWLPPTT 289
            ||:.|||||:|.:|..||:||||.|||||.||||||||:|||||.||||:|.|||:.|.:||||:
 Frog   207 APLTLLGGPLLIRAAWYTAGIVGGLSTVAMCAPSEKFLNMGGPLGIGLGLVLASSIGSAFLPPTS 271

  Fly   290 AVGAGLASMSLYGGLILFSGFLLYDTQRIVKSAELYPQYSKFPYDPINHALAIYMDALNIFIRIA 354
            ..||||.|:::||||:||..|||||||:::|.||.||.|....:||||..|.||.|.||||||:|
 Frog   272 VFGAGLYSIAIYGGLVLFGMFLLYDTQKVIKRAETYPMYGVAKFDPINSCLGIYTDTLNIFIRVA 336

  Fly   355 IILAGDQKRK 364
            ::|||...|:
 Frog   337 MMLAGSGNRR 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mics1NP_649725.2 GHITM 116..364 CDD:198413 135/247 (55%)
ghitmNP_001017195.1 GHITM 83..346 CDD:198413 140/262 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 255 1.000 Domainoid score I2008
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8667
Inparanoid 1 1.050 314 1.000 Inparanoid score I2522
OMA 1 1.010 - - QHG52085
OrthoDB 1 1.010 - - D1228054at2759
OrthoFinder 1 1.000 - - FOG0006240
OrthoInspector 1 1.000 - - otm48746
Panther 1 1.100 - - O PTHR23291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4521
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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