DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1142 and AT5G30495

DIOPT Version :10

Sequence 1:NP_788592.1 Gene:CG1142 / 40894 FlyBaseID:FBgn0037504 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_680266.2 Gene:AT5G30495 / 833073 AraportID:AT5G30495 Length:196 Species:Arabidopsis thaliana


Alignment Length:184 Identity:51/184 - (27%)
Similarity:94/184 - (51%) Gaps:23/184 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 PHLDLRQENLESNMKR-----------TKQALNPGLEQAHALPTVGKRQQPIINRAERSKTKGKG 169
            |.|.|..:...::.||           :|..|..||    .||....::...:.|.:...|.|..
plant    17 PGLSLDTKTCSTSSKRVESHESSSLWMSKSELVDGL----CLPPNDPKKINKMIRKQIKDTTGSN 77

  Fly   170 WFNLPATEITDEMRNELKIVQMRSVLNPKQFYKKNDLKS--LPKFFQIGTVL-PSHLDHYQEKKS 231
            ||::||..:|.|::.:|:::::|:|::|...|||:..:|  ..|:||||||: |:...:.:..|.
plant    78 WFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSKLAEKYFQIGTVIEPAEEFYGRLTKK 142

  Fly   232 KKKQSLVNELLEDESFQKFNKRKFNEVIKRT-----DKYAYRKNLKKMKKLKKN 280
            .:|.:|.:||:.|....::.|||..|:.:::     .|:..:.|....||.::|
plant   143 NRKATLADELVSDPKVSQYRKRKVKEIEEKSRAVTNKKWKKKGNQTTNKKQRRN 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1142NP_788592.1 Fcf2 164..254 CDD:462566 31/92 (34%)
AT5G30495NP_680266.2 Fcf2 72..165 CDD:462566 31/92 (34%)

Return to query results.
Submit another query.