DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and GLR1.1

DIOPT Version :9

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_187061.1 Gene:GLR1.1 / 819566 AraportID:AT3G04110 Length:808 Species:Arabidopsis thaliana


Alignment Length:758 Identity:148/758 - (19%)
Similarity:247/758 - (32%) Gaps:235/758 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RVLQIESINTNFLELAAFEDFLRSEH--------LSHVL--------VVRGDDADGDWKIECHQK 69
            :|..|.:...|.|.|..:::|::..|        ::.::        ||..:||| ||. |..|.
plant   118 KVPVISTFLPNTLSLKKYDNFIQWTHDTTSEAKGITSLIQDFSCKSVVVIYEDAD-DWS-ESLQI 180

  Fly    70 LLANYRVQFYRPEMSANF-----------EDLMFYGSPRTAVLVLNSEHVLVRRQVFGVASEAGY 123
            |:.|::.:......||:|           ..|......|.:|.|::...:||.| :|....:.|.
plant   181 LVENFQDKGIYIARSASFAVSSSGENHMMNQLRKLKVSRASVFVVHMSEILVSR-LFQCVEKLGL 244

  Fly   124 FNNSLAWF--------------------ILGSGRESLPVEQLIDQLLSGY--RMGIDAD-----I 161
            ...:.||.                    ::|. :..:||.:.:....|..  |||.|.:     :
plant   245 MEEAFAWILTARTMNYLEHFAITRSMQGVIGF-KSYIPVSEEVKNFTSRLRKRMGDDTETEHSSV 308

  Fly   162 TVALRGPD----------------------NASMLFYDVYRISR--------QANTPLII----- 191
            .:.||..|                      |.|....|..|.||        |.:....|     
plant   309 IIGLRAHDIACILANAVEKFSVSGKVEASSNVSADLLDTIRHSRFKGLSGDIQISDNKFISETFE 373

  Fly   192 ------EKK---GLWTHSGGYQKFGNFKN-TWVIRRRNFLNVTLIGSTVLTEKPPGFGDMEYL-- 244
                  ||:   |||  |||  .|...:. .|..|.|.     :....||.||    |:.:.|  
plant   374 IVNIGREKQRRIGLW--SGG--SFSQRRQIVWPGRSRK-----IPRHRVLAEK----GEKKVLRV 425

  Fly   245 ---ADDK--QLQQLDP--------MQRKTYQLFQLVERMFNLSLAI----SLTDKWGELLDNGSW 292
               |.:|  .|..:.|        :.....::|:.....||..|..    ...|....||.    
plant   426 LVTAGNKVPHLVSVRPDPETGVNTVSGFCVEVFKTCIAPFNYELEFIPYRGNNDNLAYLLS---- 486

  Fly   293 SGVMGQVTSREA-DFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKNIFFEPLSNQV 356
                   |.|:. |.||..|....:|..||.::.......|..| ...::|.....||:|....:
plant   487 -------TQRDKYDAAVGDITITSNRSLYVDFTLPYTDIGIGIL-TVKKKSQGMWTFFDPFEKSL 543

  Fly   357 WWC--VLALVTGSTILLLFHVRLERMLSNMENRFSFVWFTMLETYLQQGPANEIF------RLFS 413
            |..  ...::||..:.|     :||   ::...|...|...|...|..|.:..:|      :..|
plant   544 WLASGAFFVLTGIVVWL-----VER---SVNPEFQGSWGQQLSMMLWFGFSTIVFAHREKLQKMS 600

  Fly   414 TRLLISLSCIFSFMLMQFYGAFIVGSLLSESARSIVNLQALYDSNLAIGMENISYNFPIFTNTSN 478
            :|.|:.:......:|...|.|.:.      |.::|..:|..:..              :|..::.
plant   601 SRFLVIVWVFVVLILTSSYSANLT------STKTISRMQLNHQM--------------VFGGSTT 645

  Fly   479 QLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAFHTAIDRMYRLLLELQMDEA--EFCDLQEV 541
            .:.        .|.|..|                    |::...:||.:..::..  |...|..:
plant   646 SMT--------AKLGSIN--------------------AVEAYAQLLRDGTLNHVINEIPYLSIL 682

  Fly   542 MFNLPYD------------SGSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFK 594
            :.|.|.|            .|.:..|||.....::..:...|:.|:|:..:|||..:....::..
plant   683 IGNYPNDFVMTDRVTNTNGFGFMFQKGSDLVPKVSREIAKLRSLGMLKDMEKKWFQKLDSLNVHS 747

  Fly   595 TSQ--AEVDLEHFAPALFA-------LALAMVASALVFLLELF 628
            .::  |..:.:..|...|.       ..:|..|..||..|.||
plant   748 NTEEVASTNDDDEASKRFTFRELRGLFIIAGAAHVLVLALHLF 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 nt_trans <54..>112 CDD:294020 18/68 (26%)
Periplasmic_Binding_Protein_Type_2 222..583 CDD:304360 73/402 (18%)
Lig_chan 355..602 CDD:278489 44/270 (16%)
GLR1.1NP_187061.1 PBP1_GABAb_receptor 31..397 CDD:107361 60/286 (21%)
ANF_receptor 45..377 CDD:279440 51/262 (19%)
Periplasmic_Binding_Protein_Type_2 421..737 CDD:304360 69/383 (18%)
Lig_chan 542..781 CDD:278489 47/294 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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