DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and Ir94d

DIOPT Version :9

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster


Alignment Length:618 Identity:114/618 - (18%)
Similarity:211/618 - (34%) Gaps:207/618 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EDLM--FYGSPRTAVLVLNSEHVL--VRRQVFGVASEAGYFNNSLAW----------FILGSGRE 138
            ||::  .|.:.|    :||::.||  :|:....|       |:.|.|          .|.....|
  Fly    91 EDILEILYRNLR----MLNTQPVLLVIRKSTIRV-------NSLLEWCWHHQLLKVVAIAQDFME 144

  Fly   139 SL--------PVEQLIDQLLSGYRMGIDADITVALRGPDNASMLF---------YDVYRISRQAN 186
            ||        ||.|.|::.|                  ||::::|         |:| .|:...:
  Fly   145 SLIVYSYNPFPVLQFIERRL------------------DNSTVIFEKRLENLHGYEV-PIALGGS 190

  Fly   187 TPLII---EKKGLWTHSGGYQKFGNFKNTWVIRRRNFLNVTLIGSTVLTEKPPGFGDMEYLADDK 248
            :|.:|   :.:|....||   ..|||..::..|    .|..|:       :|..|.:        
  Fly   191 SPRLIVYRDLEGKLIFSG---PVGNFMKSFEQR----YNCRLV-------QPYPFDE-------- 233

  Fly   249 QLQQLDPMQRKTYQLFQLVERMFNLSLAISLTDKWGELLDNGSWSGVMGQVTSREADFAVCPIRF 313
              ..:.|.:       .|:..:.|.|:.|:|.                          |:.|   
  Fly   234 --SAISPAR-------DLIASVQNGSVQIALG--------------------------AIYP--- 260

  Fly   314 VLDRQPYVQYSAVLHTQNIHFLFRHPR---RSHIKNIFFEPLSNQVWWCVLALVTGSTI--LLLF 373
               :.||..||..:...:...:...|.   .|.:.::.|.|::           .|.||  ::|.
  Fly   261 ---QVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSMVFSPMA-----------FGITIVAMVLI 311

  Fly   374 HVRLERMLSNMENRFSFVWFTMLETYLQQGPANEIFRLFSTRLLIS----LSCIFSFMLMQFYGA 434
            .:.|...|.....|.||..:.:.::.|:...:...:.:.....||.    :.|:...::..:|.:
  Fly   312 SLTLSMALRLHGYRVSFSEYFLHDSCLRGVLSQSFYEVLRAPALIKAMYLVICLLGLLITSWYNS 376

  Fly   435 FIVGSLLSESAR--SIVNLQALYDSNLAIGMENISYNFPIFTNTSNQLVRDVYVKKICKSGEHNI 497
            :. .:.::.:.|  .:.:.:::..||:.|.:....|...:|.:.:.:....::            
  Fly   377 YF-STFVTSAPRFPQLTSYESIRHSNIKIVIWKPEYEMLLFFSENMEKYSSIF------------ 428

  Fly   498 MSLQQGAERIIQGRFAFHTAIDRMYRL----------------LLELQMDEAEFCDLQEVMFNLP 546
             .||:..:..:..|.:|.|....|..:                |..||.|   .|....|....|
  Fly   429 -QLQEDYKEFLHLRDSFDTRYGYMMPMEKWSLMKEQQRVFSSPLFSLQDD---LCVFHTVPIVFP 489

  Fly   547 YDSGSVMPKGSPWREHLAHALLHFRATGLL-QYNDKKW--MVRRPDCSL--------FKTSQAE- 599
                  |.|.|.::|.....:|...||||| ::.|..:  |::.....|        |:..:.. 
  Fly   490 ------MVKNSIFKEPFDRLILDVTATGLLSRWRDMSFTEMIKAGQLGLEDRGHPKEFRAMKVGD 548

  Fly   600 -VDLEHFAPALFALALAMVASALVFLLELFLHW 631
             :.:..|...:..||      .:||||||...|
  Fly   549 LIQIWRFVGWMLGLA------TIVFLLELICFW 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 nt_trans <54..>112 CDD:294020 8/27 (30%)
Periplasmic_Binding_Protein_Type_2 222..583 CDD:304360 64/388 (16%)
Lig_chan 355..602 CDD:278489 47/283 (17%)
Ir94dNP_001138099.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462973
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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