DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and grid1b

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:480 Identity:116/480 - (24%)
Similarity:195/480 - (40%) Gaps:70/480 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 IEKKGLWTHSGGYQKFGNFKNTWVIRRRNFLNVTLIGSTVLTEKPPGFGDMEYLADDKQ------ 249
            |::...|....|..  |:.|.:   |..|.:....:....|.|.|........|...|:      
Zfish   410 IKRLATWDSVHGLN--GSLKES---RIENGMQGVTVKVVTLLEDPFVMVAENILGQPKRYKGFSI 469

  Fly   250 --LQQLDPMQRKTYQLFQLVERMFNLSLAISLTDKWGELLDNGSWSGVMGQVTSREADFAVCPIR 312
              |:.|..:....|.::|:.:            .|:|..|.||||:|::|::.::.||.||..|.
Zfish   470 DVLEALAKILGFKYDIYQVAD------------SKYGSQLSNGSWNGMIGELINKRADLAVSAIT 522

  Fly   313 FVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKNIF--FEPLSNQVWWCVLAL--VTGSTILLLF 373
            ...:|:..|.:|......::..|.|.|...  .|||  |.|....||.|:.|.  |.|..|.||.
Zfish   523 ITPERENVVDFSKRYMDYSVGILHRKPEEK--INIFSLFAPFDLAVWACIAAAIPVVGVLIFLLT 585

  Fly   374 HVRLERM--------LSNMENRF-SFVWFTMLETYLQQGPANEIFRLFSTRLLISLSCIFSFMLM 429
            .:::.|.        .|:|.|.. |.:|. :...::||| .:.:....:.|:::....:|:.::.
Zfish   586 RMQMLRSQNPPGAHHASSMSNSLHSAIWI-VYGAFVQQG-GDSVVGSVALRIVMGSWWLFTLIVC 648

  Fly   430 QFY----GAFIVGSLLSESARSIVNLQALYDSNLAIGMENISYNFPIF-TNTSNQLVRD-VYV-- 486
            ..|    .||:..|.:..:.|:..:|....|  .|.|....|..:..| ...:|.|.:| .|.  
Zfish   649 SSYTANLAAFLTVSRMDNTIRTFQDLARQMD--FAYGTVRDSAVYDYFKAKGTNPLEQDSTYAEL 711

  Fly   487 -KKICKSG--EHNIMSLQQGAERIIQGRFAF--HTAIDRMYRLLLELQMDEAEFCDLQEVMFNLP 546
             :.|.|:.  :.::.|..:|..:..:|.:||  ..|:.. |..|.:   |:.........|.:..
Zfish   712 WRTISKNNGQDFSVSSPSEGIRKAKKGPYAFLWDMAVVE-YAALTD---DDCTITVSGNSMSSKG 772

  Fly   547 YDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAEVD-----LEHFA 606
            |  |..|..|||:|:.::..:|..:..|.|....:||..|...|.|...|.|:.|     |..||
Zfish   773 Y--GIAMQHGSPYRDLISQKILELQEKGDLDVLKQKWWPRTGRCDLNSHSNAQPDGRSLKLHSFA 835

  Fly   607 PALFALALAMVASALVFLLELFLHW 631
            .....||..::.:.||..||::  |
Zfish   836 GVFCILAAGLLLACLVAALEMW--W 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 25/74 (34%)
Lig_chan 353..602 CDD:459656 65/277 (23%)
grid1bXP_009304811.1 PBP1_iGluR_delta_1 25..426 CDD:380615 4/17 (24%)
Periplasmic_Binding_Protein_Type_2 437..809 CDD:473866 93/395 (24%)
Blue background indicates that the domain is not in the aligned region.

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