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Protein Alignment Ir84a and Grik2

DIOPT Version :9

Sequence 1:	NP_649720.2	Gene:	Ir84a / 40891	FlyBaseID:	FBgn0037501	Length:	644	Species:	Drosophila melanogaster
Sequence 2:	NP_062182.1	Gene:	Grik2 / 54257	RGDID:	2733	Length:	908	Species:	Rattus norvegicus

Alignment Length:	468	Identity:	101/468 - (21%)
Similarity:	191/468 - (40%)	Gaps:	50/468 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly   191 IEKKGLWTHSGGYQKFGNFKNTWVIRRRNFLNVTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDP 255
            :||.|.|..:.|.....:.|........:..|.:||.:|:| |:|    .:.:...||.|...|.
  Rat   399 LEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLIVTTIL-EEP----YVLFKKSDKPLYGNDR 458

  Fly   256 MQRKTYQLFQLVERMFNLSLAISLTD--KWGELLD-NGSWSGVMGQVTSREADFAVCPIRFVLDR 317
            .:.....|.:.:..:...:..|.|.:  |:|...| ||.|:|::.::...:||.||.|:.....|
  Rat   459 FEGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAITYVR 523

  Fly   318 QPYVQYSAVLHTQNIHFLFRHPRRSHIKNI-FFEPLSNQVWWCVLALVTGSTILLLFHVRLERM- 380
            :..:.:|....|..|..|:|.|..::.... |..|||..:|..||....|.:.:|....|....
  Rat   524 EKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFSPYE 588

  Fly   381 ----------LSNMENRFSFV---WFTMLETYLQQGPANEIF-RLFSTRLLISLSCIFSFMLMQF 431
                      ...:||.|:.:   ||. :...::||  :|:. :..|||::..:...|:.:::..
  Rat   589 WYNPHPCNPDSDVVENNFTLLNSFWFG-VGALMRQG--SELMPKALSTRIVGGIWWFFTLIIISS 650

  Fly   432 YGAFIVGSLLSESARSIVNL--QALYDSNLAIGMENISYNFPIFTNTSNQLVRDVYVKKICKSGE 494
            |.|.:...|..|...|.::.  .....:.:..|..........|..:.......::.....:...
  Rat   651 YTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQS 715

  Fly   495 HNIMSLQQGAERIIQGRFAFHTAIDRMYRLLLE---LQMDEAEFCDLQEV---MFNLPYDSGSVM 553
            ..:.|.::|.:|::...:||          |:|   ::......|:|.::   :.:..|..|:
  Rat   716 VLVKSNEEGIQRVLTSDYAF----------LMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGT-- 768

  Fly   554 PKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAE-VDLEHFAPALFALALAMV 617
            |.|||:|:.:..|:|..:..|.|....:||. |...|...::.:|. :.:::.......||..:|
  Rat   769 PMGSPYRDKITIAILQLQEEGKLHMMKEKWW-RGNGCPEEESKEASALGVQNIGGIFIVLAAGLV 832

  Fly   618 ASALVFLLELFLH 630
            .|..|.:.| ||:
  Rat   833 LSVFVAVGE-FLY 844

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.