Sequence 1: | NP_649720.2 | Gene: | Ir84a / 40891 | FlyBaseID: | FBgn0037501 | Length: | 644 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_113796.1 | Gene: | Gria1 / 50592 | RGDID: | 621531 | Length: | 907 | Species: | Rattus norvegicus |
Alignment Length: | 713 | Identity: | 154/713 - (21%) |
---|---|---|---|
Similarity: | 268/713 - (37%) | Gaps: | 188/713 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MIKLQVKVISWPLIILTAFLRVLQIE-------SINTNFLELAAFEDFL---------RSEHLSH 49
Fly 50 VLVVRGDDADGDWKIECHQKLLANYRVQFYRPEMSANFEDLMFYGSPRT--AVLVLNSEHVLVRR 112
Fly 113 QVFGVA--SEAG--YFNNSLAWFILGSGRESLPVEQLIDQLLSGYRM-GIDADITVALRGPDNAS 172
Fly 173 MLFYDVYRISRQANTPL-IIEKK-------GLWTHSGGY-------QKFGNFKNTWVIRRRNFLN 222
Fly 223 VTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDPMQRKTYQLFQLVERM-----FNLSLAISLTDK 282
Fly 283 WGEL-LDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKN 346
Fly 347 I-FFEPLSNQVWWCVLALVTGSTILLL--------------FHVRLERMLSNMENRFSF---VWF 393
Fly 394 TMLETYLQQG----PANEIFRLFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSESARSIVNLQAL 454
Fly 455 YD----SNLAIGMENISYNFPIFTNTSNQLVRDVYVKKICKSGEHNIM--SLQQGAERI--IQGR 511
Fly 512 FAFHTAIDRMYRLLLELQMDE----AEFCDLQEVMFNLPYDS---GSVMPKGSPWREHLAHALLH 569
Fly 570 FRATGLLQYNDKKWMVRRPDC------SLFKTSQAEVDLEHFAPALFALALAMVASALVFLLE 626 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir84a | NP_649720.2 | nt_trans | <54..>112 | CDD:294020 | 10/59 (17%) |
Periplasmic_Binding_Protein_Type_2 | 222..583 | CDD:304360 | 91/403 (23%) | ||
Lig_chan | 355..602 | CDD:278489 | 65/288 (23%) | ||
Gria1 | NP_113796.1 | PBP1_iGluR_AMPA_GluR1 | 26..392 | CDD:380613 | 44/236 (19%) |
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 94/416 (23%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 1/1 (100%) |