DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and Ir85a

DIOPT Version :9

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster


Alignment Length:637 Identity:120/637 - (18%)
Similarity:209/637 - (32%) Gaps:190/637 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 RTAVLVLNSEHVL--VRRQVFGVASEAGYFNNSLAWFILGS----------GRESLPVEQLIDQL 149
            :::::::....:|  .|.:|..|     ||.|..:....|.          ..::.|:|.:.|..
  Fly    32 KSSIVMVKMSQILCKARIKVLFV-----YFENQTSHEHTGQILKEVTKCDISNQNTPLEAVKDDG 91

  Fly   150 LSGYRMGIDADIT----VALRGPDNASMLFYDVYRISRQANTPLIIEKKGLWTHSGGYQKFGNFK 210
            :..|.:.|..:|:    ::|....:|:.....|:.:.|.|:|     ....|..:    .|..|.
  Fly    92 ILMYMVMITTNISQPLELSLIRKKSAAKHRSHVFLLVRDADT-----VSDAWMRA----SFRQFW 147

  Fly   211 NTWVIRRRNFLNVTLI----GSTVLTEKPPGFGDMEYL--ADDK-----QLQQLDP-----MQRK 259
            ..|:      ||:.::    |........| |.| .||  .|:|     .|:||.|     ||||
  Fly   148 KIWL------LNIVILYWRDGRLNAYRYNP-FMD-NYLIPVDNKPNEVPTLEQLFPKTIPNMQRK 204

  Fly   260 TYQLFQLVERMFNLSLAISLTDKWGELLDNGSWSGVMGQVTSREAD------------------- 305
            .            |.:.|...|........|:..|..|.:.:..|:                   
  Fly   205 P------------LRMCIYKDDVRAIFWRQGTILGTDGLLAAYVAERLNATMMITRPHSYNNHNL 257

  Fly   306 -FAVCPIRFVLDRQPYVQYSAVLHTQNIHFL----FRHPRRSHIKNI------------------ 347
             ..:|   |:...:.||..:     .||.||    ||....|.:.:.                  
  Fly   258 SSDIC---FLEVAKEYVDVA-----MNIRFLVPDTFRKQAESTVSHTRDDLCVIVPKAKTAPTFW 314

  Fly   348 -FFEPLSNQVWWCVLALVTGSTILLLFHVRLERMLSNMENRFSFVWFT-MLETYLQQGPANEIFR 410
             .|....:.||..:|..|..:.:...       :|.:...|.....|. .|...:.|.|.|...|
  Fly   315 NIFRSFGSLVWALILVSVLVANVFCY-------ILKSEVGRVPMQLFAGALTMPMTQIPPNHSIR 372

  Fly   411 LFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSESARSIVNLQA-LYDSNLAIGMENISYNFPIFT 474
            |              |::...|...::.|....:..|::..|. |.|.|....:....|:.    
  Fly   373 L--------------FLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDINQLGALARSHYHI---- 419

  Fly   475 NTSNQLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAFHTAIDRMYRLL---------LE--- 527
                 ::|..:||.|     .:.::|....|..|:.:. ...:..:||.::         ||   
  Fly   420 -----IIRPRHVKHI-----QHFLTLGHKHESRIREQM-LEVSDTQMYEMMRNNDIRFAYLEKYH 473

  Fly   528 ---LQMDEAEFCDLQEVMFNL------PYDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDK-- 581
               .|::......|...:|:|      |:.:..::|.|||:...|...:......|..:|.|:  
  Fly   474 IARFQVNSRVHMHLGRPLFHLMNSCLVPFHAVYIVPYGSPYLGFLDSLIRSSHEFGFERYWDRIM 538

  Fly   582 ---------KWMVRRPDCSLFKTSQAEVDLEHFAPALFALALAMVASALVFL 624
                     |.:.||....  ......:.|:|| .|:|||.|..:..|.:.|
  Fly   539 NSAFIKSGVKVVNRRRGSG--NDEPVVLKLQHF-HAVFALWLVGIGMACIVL 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 nt_trans <54..>112 CDD:294020 1/16 (6%)
Periplasmic_Binding_Protein_Type_2 222..583 CDD:304360 82/453 (18%)
Lig_chan 355..602 CDD:278489 49/280 (18%)
Ir85aNP_649833.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462950
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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