DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir84a and Ir68a

DIOPT Version :9

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:609 Identity:109/609 - (17%)
Similarity:197/609 - (32%) Gaps:191/609 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SEHLSHVLVVRGDDADGDWKIECHQKL--LANYRVQFYRPEMSANFEDLMFYGSPRTAVLVLNSE 106
            |||:..||......:....::|....|  ..|::..:|:|..:.|.:.....|....|       
  Fly   229 SEHVPMVLWANATKSFQGVEVEIMNALGKALNFKPVYYKPNQTENMDWTELDGGASVA------- 286

  Fly   107 HVLVRRQVFGVASEAGYFNNSLAWFILGSGRESLPVEQLIDQLLSGYRMGIDADI--------TV 163
                    :|..:..||..|       |:..:|:    |:|::.:........|:        .|
  Fly   287 --------YGSGNPDGYAQN-------GTHIDSM----LVDEVAAHSARFAIGDLHLFQVYLKLV 332

  Fly   164 ALRGPDNASMLFYDVYRISRQANTP------LIIEKKGLWTHSGGYQKFGNFKNTWVI----RRR 218
            .|..|.|...|.:    ::.:::|.      ::....|:|.        |...:.:|:    ...
  Fly   333 ELSAPHNFECLTF----LTPESSTDNSWQTFILPFSAGMWV--------GVLLSLFVVGTVFYAI 385

  Fly   219 NFLNVTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDPMQRKTYQLFQLVERMFNLSLAISLTDKW 283
            :||| .:|...|.:|      ....|..::.:    ||..|.|       |..:..:|||     
  Fly   386 SFLN-AIINGNVSSE------FFRCLRPNRNV----PMDPKIY-------RRISFRIAIS----- 427

  Fly   284 GELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKNIF 348
                          :..|.:.|                               |.||.      .
  Fly   428 --------------RYRSSKGD-------------------------------RMPRD------L 441

  Fly   349 FEPLSNQVWWCVLALVTGSTILLLFHVRLERMLSNMENRFSFVWFTMLETYLQQGPANEIFRLFS 413
            |:..:|    |:|.     |..:|.:|.|.||..|...|....|:                    
  Fly   442 FDGYTN----CILL-----TYSMLLYVALPRMPRNWPLRVLTGWY-------------------- 477

  Fly   414 TRLLISLSCIFSFMLMQFYGAFIVGSLLSESAR-SIVNLQALYDSNLAIGMENISYNFPIFTNTS 477
                    .|:..:|:..|.|.....|.:.:|| :|..|:.|..|::. .....:.|...|...:
  Fly   478 --------WIYCILLVATYRASFTAILANPAARVTIDTLEDLLRSHIP-PSTGATENRQFFLEAN 533

  Fly   478 NQLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAFHTAIDRMYRLLLELQMDE--AEFCDLQE 540
            :::.|.|..|........::.|      ||.:|:.|::   |..:.|......||  :....::|
  Fly   534 DEVARKVGEKMEVFGYSDDLTS------RIAKGQCAYY---DNEFYLRYLRVADESGSALHIMKE 589

  Fly   541 VMFNLPYDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWM---VRRPDCSLFKTSQAEVDL 602
            .:..:|.  ...|.|.|..:..:..::.|....||:    .||:   :...........:|.:::
  Fly   590 CVLYMPV--VLAMEKNSALKPRVDASIQHLAEGGLI----AKWLKDAIEHLPAEALAQQEALMNI 648

  Fly   603 EHFAPALFALALAMVASALVFLLE 626
            :.|..:..||.:..|.|.|..|.|
  Fly   649 QKFWSSFVALLIGYVISMLTLLAE 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 nt_trans <54..>112 CDD:294020 8/59 (14%)
Periplasmic_Binding_Protein_Type_2 222..583 CDD:304360 64/363 (18%)
Lig_chan 355..602 CDD:278489 47/252 (19%)
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 57/321 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462712
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.