DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and Ir25a

DIOPT Version :9

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster


Alignment Length:674 Identity:137/674 - (20%)
Similarity:238/674 - (35%) Gaps:171/674 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 NYRVQFYRPEMSANFEDLMFYGSPRTAVLVLNSEHVLVRRQVFGVASEAGYFNNSLAWFI----- 132
            |..:.|.:|.....:.|.:  |..|| ...||.|..|         |.|.||:.:|..|:     
  Fly   277 NATIMFMKPMAYTQYRDRL--GLLRT-TYNLNEEPQL---------SSAFYFDLALRSFLTIKEM 329

  Fly   133 LGSGRESLPVEQL-IDQLLSGY--RMGID-ADITVALRGPDNASMLFYDVYRISRQANTPLIIEK 193
            |.||.....:|.| .|....|.  :..:| .|....:..|.:     |..:.:..|:..|.    
  Fly   330 LQSGAWPKDMEYLNCDDFQGGNTPQRNLDLRDYFTKITEPTS-----YGTFDLVTQSTQPF---- 385

  Fly   194 KGLWTHSGGYQKFGNFKNTWVIRRRNFLNVTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDPMQR 258
                 :...:.||....|...||..:.:|...||..:     .|......:.|::|::.|  ...
  Fly   386 -----NGHSFMKFEMDINVLQIRGGSSVNSKSIGKWI-----SGLNSELIVKDEEQMKNL--TAD 438

  Fly   259 KTYQLFQLVERMF-------------------NLSLAISLTD---------KWGELLDNGSWSGV 295
            ..|::|.:|:..|                   |...||...|         |:|.:.:||.|:|:
  Fly   439 TVYRIFTVVQAPFIMRDETAPKGYKGYCIDLINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGI 503

  Fly   296 MGQVTSREADFAVCPIRFVLDRQPYVQYSAVLH-TQNIHFLFRHPRRSHIKNIFFEPLSNQVWWC 359
            :.::..::||..:..:..:.:|:..:.::...: ...|..:.:.|........|...|...||.|
  Fly   504 VKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLC 568

  Fly   360 VLALVTGSTILLLFHVR---------LERMLSNMENR-FSF---VWFTMLETYLQQG---PANEI 408
            :||....::.|:....|         .|:...:.|.| |:.   :||.|.....|.|   |.|  
  Fly   569 ILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKECLWFCMTSLTPQGGGEAPKN-- 631

  Fly   409 FRLFSTRLLISLSCIFSFMLMQFY----GAFIVGSLLSESARSIVNLQALY-------------- 455
               .|.||:.:...:|.|:::..|    .||:..|.|.....|:.:|...|              
  Fly   632 ---LSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSSAMT 693

  Fly   456 ----------------------DSNLAIGMENIS-YNFPIFTNTSNQLVRDVYVKKICKSGEHNI 497
                                  ||..|:....:: :::|         |.|.|.|......|..:
  Fly   694 YFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYP---------VSDKYTKMWQAMQEAKL 749

  Fly   498 -MSLQQGAERIIQGR----FAF-HTAIDRMYRLLLELQMDEAEFCDLQ---EVMFNLPYDSGSVM 553
             .:|.:...|:....    ||| ..|.|..|     ||:..   ||||   |.....||  ...:
  Fly   750 PATLDEAVARVRNSTAATGFAFLGDATDIRY-----LQLTN---CDLQVVGEEFSRKPY--AIAV 804

  Fly   554 PKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAE-----VDLEHFAPALFALA 613
            .:||..::...:|:|.......|:...:||.  :.|.:|.|..:.|     :.:::.. .:|.:.
  Fly   805 QQGSHLKDQFNNAILTLLNKRQLEKLKEKWW--KNDEALAKCDKPEDQSDGISIQNIG-GVFIVI 866

  Fly   614 LAMVASALVFLLELFLHWLPDFRR 637
            ...:..|.:.|  :|.:|...:|:
  Fly   867 FVGIGMACITL--VFEYWWYRYRK 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 nt_trans <54..>112 CDD:294020 11/38 (29%)
Periplasmic_Binding_Protein_Type_2 222..583 CDD:304360 90/455 (20%)
Lig_chan 355..602 CDD:278489 68/317 (21%)
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 39/179 (22%)
PBP2_iGluR_putative 438..836 CDD:270435 85/423 (20%)
Lig_chan 565..870 CDD:278489 69/331 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462982
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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