DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir84a and Ir8a

DIOPT Version :9

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster


Alignment Length:782 Identity:153/782 - (19%)
Similarity:263/782 - (33%) Gaps:239/782 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LQIESINTNFLELAAFEDFLRSEHLSHVLVVRGDDADGDWKIECHQKLLANY------------- 74
            :::|.|...||::  |.||:|.:..::|.:|..:..|.   :|..|::|..|             
  Fly   108 VRLERIMRPFLDM--FGDFMRQKRANNVAMVFMNARDA---VEAMQQMLVGYPFRTLIMDASQTD 167

  Fly    75 -------RVQFYRPEMSANFEDLMFYGSPRTAVLVLNSEHVLVRRQVFGVASEAGYFNNSLAW-F 131
                   |::..||             :|....|...:   .....:|....:|..|...|.| |
  Fly   168 PGQHFLERIRSLRP-------------APTYIALFARA---AAMNGIFEKVQKADLFQRPLEWHF 216

  Fly   132 ILGSGRE------------------------SLPVEQL----------------------IDQLL 150
            :....|:                        |:|:..|                      ..|:.
  Fly   217 VFLDTRDRVFKYRRQAELCTRFTLNPRAICRSMPMPDLYCGSGFTMQRAMLLNVLRSLINAAQVS 281

  Fly   151 SGYRMGIDADITVALRGPDNASMLFYDVY-------------------RISRQANTPLIIEKKGL 196
            .||.:.|..|........:.:..|..|.|                   .|..|..:|:    .||
  Fly   282 PGYPLAIYQDCNATASSSEVSDPLEKDDYNWLDMVHWSNFLAYAPPLPHIQDQFQSPV----PGL 342

  Fly   197 W---THSGGYQKFGNFKNT----W-VIRRRNFLNVTL--------IGSTVLTEKPPGFGDMEYLA 245
            .   ..|.||....:...|    | .:.....||.|:        ||:   .|..|    ..||.
  Fly   343 TFAVNISAGYYSSEHEAKTDLAAWSSVGEMRLLNETISPARRFFRIGT---AESIP----WSYLR 400

  Fly   246 DDKQLQQL--DPMQRKTYQ------LFQLVERM-FNLSLAISLTDKWGELLDNGSWSGVMGQVTS 301
            .::...:|  |......::      :.:|.::: |...:........|||.:.|.|.||:|.:..
  Fly   401 REEGTGELIRDRSGLPIWEGYCIDFIIRLSQKLNFEFEIVAPEVGHMGELNELGEWDGVVGDLVR 465

  Fly   302 READFAVCPIRFVLDRQPYVQYSAVLHTQ-NIHFLFRHPRRSHIKNIFFEPLSNQVWWCVLALVT 365
            .|.|||:..::...:|:..:.:....:.| .|....|.|.|......|...|..:||..::|.:.
  Fly   466 GETDFAIAALKMYSEREEVIDFLPPYYEQTGISIAIRKPVRRTSLFKFMTVLRLEVWLSIVAALV 530

  Fly   366 GSTILLLFHVRLERMLSNMENRFSF------------VWFTMLETYLQQGPANEIFRLFSTRLLI 418
            |:.|::.|..:.. ..|:..||.::            .||. |.::..|| ..|..:..|.|:|:
  Fly   531 GTAIMIWFMDKYS-PYSSRNNRQAYPYACREFTLRESFWFA-LTSFTPQG-GGEAPKAISGRMLV 592

  Fly   419 SLSCIFSFMLMQFY----GAFI--------VGSLLSESARSIVNLQALYDSN------------- 458
            :...:|..:::..:    .||:        |.||...:.:|.:|...:.||:             
  Fly   593 AAYWLFVVLMLATFTANLAAFLTVERMQTPVQSLEQLARQSRINYTVVKDSDTHQYFVNMKFAED 657

  Fly   459 --------LAIGMENIS--------YNFPI--------FTNTSNQLVRDVYVKKICKSGEHNIMS 499
                    ||:   |.|        :::||        ....|:|.|.|      .|.|..|: .
  Fly   658 TLYRMWKELAL---NASKDFKKFRIWDYPIKEQYGHILLAINSSQPVAD------AKEGFANV-D 712

  Fly   500 LQQGAERIIQGRFAF-HTAIDRMYRLLLELQMDEAEFCDLQEVMFNLPYDSGSVMPKGSPWREHL 563
            ..:.|:      :|| |.:.:..|.:.....:.|     :.||....||  ...:.:||...:.|
  Fly   713 AHENAD------YAFIHDSAEIKYEITRNCNLTE-----VGEVFAEQPY--AVAVQQGSHLGDEL 764

  Fly   564 AHALLHFRATGLL-QYNDKKW-MVRRPDCSLFKTSQAEVDLEH----FAPALFALALAMVASALV 622
            ::|:|..:..... :...|.| ....|:|.| ...|..:.||.    |...||.|.|||:...:.
  Fly   765 SYAILELQKDRFFEELKAKYWNQSNLPNCPL-SEDQEGITLESLGGVFIATLFGLVLAMMTLGME 828

  Fly   623 FL 624
            .|
  Fly   829 VL 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 nt_trans <54..>112 CDD:294020 10/77 (13%)
Periplasmic_Binding_Protein_Type_2 222..583 CDD:304360 89/441 (20%)
Lig_chan 355..602 CDD:278489 62/310 (20%)
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 87/435 (20%)
Lig_chan 520..818 CDD:278489 67/324 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.