DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir84a and GRIK3

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:659 Identity:137/659 - (20%)
Similarity:246/659 - (37%) Gaps:128/659 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IILTAFLRVLQIESINTNFLELAAFEDF-LRSEHLSHVLVVRGDDADGDWKIECHQKLLANYRVQ 77
            |..|..|..|.:|....:.:.|..|... :.:.|:|.::        ..|.:|         |:|
Human   258 IFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIV--------EKWSME---------RLQ 305

  Fly    78 FYRPEMSANFEDLMFYGSPRTAVLVLNSEHVL----VRRQVFGVAS------EAGYFNNSLAWFI 132
            ......|...:.:|.    ..|.|:.::.|::    .|.....|.|      :|..|......||
Human   306 AAPRSESGLLDGVMM----TDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFI 366

  Fly   133 LGSGRESLPVEQLIDQLLSGYRMGIDADITVALRGPDNASMLFYDVYRISRQANTPLIIEKKGLW 197
            ..:..|.| ..:::....||.|...|.|| ::|:...                     :||.|:|
Human   367 KEAQWEGL-TGRIVFNKTSGLRTDFDLDI-ISLKEDG---------------------LEKVGVW 408

  Fly   198 THSGGYQKFGNFKNTWVIRRR------NFLNVTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDPM 256
            :.:.|      ...|.|.:.|      :..|.:||.:||| |:|    .:.:...|:.|...|..
Human   409 SPADG------LNITEVAKGRGPNVTDSLTNRSLIVTTVL-EEP----FVMFRKSDRTLYGNDRF 462

  Fly   257 QRKTYQLFQLVERMFNLSLAISLTD--KWGELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQP 319
            :.....|.:.:..:...|..|.|.:  |:|...|.|.|:|::.::...:||.||.|:.....|:.
Human   463 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREK 527

  Fly   320 YVQYSAVLHTQNIHFLFRHPRRSHIKNI-FFEPLSNQVWWCVLALVTGSTILLLFHVRLERM--- 380
            .:.:|....|..:..|:|.|..::.... |..|||..:|..||....|.:.:|....|....   
Human   528 AIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWY 592

  Fly   381 --------LSNMENRFSFV---WFTMLETYLQQGPANEIF-RLFSTRLLISLSCIFSFMLMQFYG 433
                    ...:||.|:.:   ||.| .:.:|||  :|:. :..|||::..:...|:.:::..|.
Human   593 DAHPCNPGSEVVENNFTLLNSFWFGM-GSLMQQG--SELMPKALSTRIIGGIWWFFTLIIISSYT 654

  Fly   434 AFIVGSLLSESARSIVNL--QALYDSNLAIGMENISYNFPIFTNTSNQLVRDVYV------KKIC 490
            |.:...|..|...|.::.  .....:.:..|..........|..:.......::.      ..:.
Human   655 ANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALV 719

  Fly   491 KSGEHNIMSLQQGAERIIQGRFAFHTAIDRMYRLLLE---LQMDEAEFCDLQEV---MFNLPYDS 549
            |:.|       :|.:|          |:...|.||:|   ::......|:|.::   :.:..|..
Human   720 KNNE-------EGIQR----------ALTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGI 767

  Fly   550 GSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAE-VDLEHFAPALFALA 613
            |:  |.|||:|:.:..|:|..:....|....:||. |...|...:..:|. :.::........||
Human   768 GT--PMGSPYRDKITIAILQLQEEDKLHIMKEKWW-RGSGCPEEENKEASALGIQKIGGIFIVLA 829

  Fly   614 LAMVASALV 622
            ..:|.|.||
Human   830 AGLVLSVLV 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310 9/61 (15%)
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 21/73 (29%)
Lig_chan 353..602 CDD:459656 54/278 (19%)
GRIK3NP_000822.2 PBP1_iGluR_Kainate 37..417 CDD:380605 39/208 (19%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 86/395 (22%)

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