DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir84a and GRIK1

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001317923.1 Gene:GRIK1 / 2897 HGNCID:4579 Length:949 Species:Homo sapiens


Alignment Length:516 Identity:121/516 - (23%)
Similarity:202/516 - (39%) Gaps:81/516 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 SGYRMGIDADITVALR--GPDNA----SMLFYDVYRISRQANTPLIIEKKGLWTHSGGYQKFGNF 209
            :|.|...|.|| ::|:  |.:.|    |...|.|::            |.|:|..:.|.....:.
Human   382 NGLRKDFDLDI-ISLKEEGTEKAAGEVSKHLYKVWK------------KIGIWNSNSGLNMTDSN 433

  Fly   210 KNTWVIRRRNFLNVTLIGSTVLTEKPPGFGDMEYLADDKQLQQLDPMQRKTYQLFQLVERMFNLS 274
            |:.......:..|.|||.:|:| |:|    .:.|...||.|...|..:.....|.:.:..:....
Human   434 KDKSSNITDSLANRTLIVTTIL-EEP----YVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFI 493

  Fly   275 LAISLT--DKWGELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFR 337
            ..:.|.  .|:|...|.|.|:|::.::....||.||.|:.....|:..:.:|....|..|..|:|
Human   494 YDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYR 558

  Fly   338 HPRRSHIKNI-FFEPLSNQVWWCVLALVTGSTILLLFHVRLERM-----------LSNMENRFSF 390
            .|..::.... |..|||..:|..||....|.:.:|....|....           ...:||.|:.
Human   559 KPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTL 623

  Fly   391 V---WFTMLETYLQQGPANEIF-RLFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSESARSIVNL 451
            :   ||. :...:|||  :|:. :..|||::..:...|:.:::..|.|.:...|..|...|.:  
Human   624 LNSFWFG-VGALMQQG--SELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPI-- 683

  Fly   452 QALYDS--NLAIGMENISYNFPIFTNTSNQLVRD----VYVKKICKSGEHNI---MSLQQGAERI 507
                ||  :|| ....|.|.          .|||    .:.||...|....:   ||.:|....:
Human   684 ----DSADDLA-KQTKIEYG----------AVRDGSTMTFFKKSKISTYEKMWAFMSSRQQTALV 733

  Fly   508 IQGRFAFHTAIDRMYRLLLE---LQMDEAEFCDLQEV---MFNLPYDSGSVMPKGSPWREHLAHA 566
            ..........:...|.||:|   ::......|:|.::   :.:..|..|:  |.|||:|:.:..|
Human   734 RNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYGVGT--PIGSPYRDKITIA 796

  Fly   567 LLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAE-VDLEHFAPALFALALAMVASALVFLLE 626
            :|..:..|.|....:||. |...|......:|. :.:|:.......||..:|.|..|.:.|
Human   797 ILQLQEEGKLHMMKEKWW-RGNGCPEEDNKEASALGVENIGGIFIVLAAGLVLSVFVAIGE 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 22/73 (30%)
Lig_chan 353..602 CDD:459656 62/279 (22%)
GRIK1NP_001317923.1 PBP1_iGluR_Kainate 38..431 CDD:380605 15/61 (25%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:473866 95/396 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.