Protein Alignment Ir84a and glr-6

DIOPT Version :9

• Sequence 1: NP_649720.2
• Gene: Ir84a / 40891
• FlyBaseID: FBgn0037501
• Length: 644
• Species: Drosophila melanogaster
• Sequence 2: NP_741822.2
• Gene: glr-6 / 180955
• WormBaseID: WBGene00001617
• Length: 844
• Species: Caenorhabditis elegans
• Alignment Length: 497
• Identity: 115/497 - (23%)
• Similarity: 200/497 - (40%)
• Gaps: 93/497 - (18%)

  Fly   182 SRQANTPLIIEKKGLWTHSGGYQKFGNFKNTWVIRRRNFLNVTLIGS---TVLTEKPPGFGDMEY 243
            |.::::.|.|.:.|:   :|.....|.:|:||.            ||   |:|.:..||..: .|
 Worm   353 SDRSDSELHIWEMGI---TGAGLHTGIWKSTWE------------GSKELTMLAKNIPGTHE-HY 401

  Fly   244 LADDKQ---------------LQQLDPMQRKTYQLF------QLVERM-FNLSLAISLTDKWGEL 286
            .|..::               ::::.|..|..::.|      :|.|.: ||.:|.|...:|:||
 Worm   402 QASVRESRTLKVTSIHEKPYVIEKIMPDGRIKHEGFCVDLLDKLAEMLHFNYTLKIVKDNKYGE- 465

  Fly   287 LDNGS--WSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNIHFLFR--HPRRSHIKNI 347
            ..||:  |.|::|::...:||.||.||.....|...:.::.......|..|.|  :|:.|.....
 Worm   466 RKNGTDEWDGMIGEILRGDADMAVAPITVTATRLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTR 530

  Fly   348 FFEPLSNQVWWCVLALVTGSTILLLFHVRLERMLSNMENRFSF-----VWFTMLETYLQQGPANE 407
            |..|||..| |...|:.|..|.||   |.:..:||..|:...|     ||:  |...|.:..:..
 Worm   531 FLWPLSASV-WTFSAIATVITALL---VTVAAVLSPKESTAEFKIQNSVWY--LVCILLRAGSGY 589

  Fly   408 IFRLFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSESARSIVNLQALYDSNLAIGMENISYNF-- 470
            ..:..:|||:.::...|:.:|:..|.|.. .:||:...:|:.     ::|...:|.:. .|||
 Worm   590 NCQAGATRLISAVWWSFTLVLIAQYTANF-AALLTVDRKSMP-----FNSFEELGNQT-EYNFGS 647

  Fly   471 -------PIFTNTSNQLVRDVYVKKICKSGEHNIMSLQQGAERIIQGRFAFHTAIDRMYRLLLE- 527
                   ..|..:..:..|.::.:.........:.:..:|..|::..::.|          |:|
 Worm   648 ILGGSTMQFFKYSRIETFRRLWERMQSAEPSAFVGTNHEGVNRVLNEKYVF----------LMES 702

  Fly   528 --LQMDEAEFCDLQEVMFNLPYDSGS---VMPKGSPWREHLAHALLHFRATG-LLQYNDKKWMVR 586
              |.....:.|:|..| .|:...|..   .:||||.|||.|...:|.....| :|...:..|...
 Worm   703 ATLDYQVTQNCNLTRV-GNVVLGSNGYSIALPKGSKWREKLTRQILDLNEKGIILMLKNNWWKKS 766

  Fly   587 RPDCSLFKTS--QAEVDLEHFAPALFALALAMVASALVFLLE 626
            :.:|...:..  |..:..|:.......|||......|..:||
 Worm   767 QQECQSSEPEDLQTALGAENVYGLFLLLALGSGIGVLCAVLE 808

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir84a	NP_649720.2	nt_trans	<54..>112	CDD:294020
		Periplasmic_Binding_Protein_Type_2	222..583	CDD:304360	96/410 (23%)
		Lig_chan	355..602	CDD:278489	58/269 (22%)
glr-6	NP_741822.2	PBP1_iGluR_non_NMDA-like	21..394	CDD:380591	13/55 (24%)
		PBP2_iGluR_Kainate	409..764	CDD:270432	88/379 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18966
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010