Sequence 1: | NP_649720.2 | Gene: | Ir84a / 40891 | FlyBaseID: | FBgn0037501 | Length: | 644 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_579842.2 | Gene: | Grin3b / 170796 | RGDID: | 621705 | Length: | 1002 | Species: | Rattus norvegicus |
Alignment Length: | 418 | Identity: | 85/418 - (20%) |
---|---|---|---|
Similarity: | 164/418 - (39%) | Gaps: | 57/418 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 266 LVERM-----FNLSLAISLTDKWGELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSA 325
Fly 326 VLHTQNIHFLFRHPRRSHIKNIFFEPLSNQVWWCVL-ALVTGSTILLLFHVRLERMLS----NME 385
Fly 386 NRFSF-----VWFTML--ETYLQQGPANEIFRLFSTRLLISLSCIFSFMLMQFYGAFIVGSLLSE 443
Fly 444 SARSIVNLQALYDSNLAIGMENISYNFPIFTNTSNQLVRDVYVKKICKSGEHNIMSLQQGAERII 508
Fly 509 QGRFAFHTAIDRMYRLLLELQMDEAEFCDLQEVMFNLPY---DSGSVMPKGSPWREHLAHALLHF 570
Fly 571 RATGLLQYNDKKWMVRRPDCS--LFK-TSQAEVDLEHFAPALFALALAMVASAL-------VFL- 624
Fly 625 -----------LELFLHWLPDFRRRLGT 641 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ir84a | NP_649720.2 | nt_trans | <54..>112 | CDD:294020 | |
Periplasmic_Binding_Protein_Type_2 | 222..583 | CDD:304360 | 63/336 (19%) | ||
Lig_chan | 355..602 | CDD:278489 | 46/264 (17%) | ||
Grin3b | NP_579842.2 | PBP1_iGluR_NMDA_NR3 | 21..405 | CDD:107372 | |
PBP2_iGluR_NMDA_Nr3 | 414..808 | CDD:270438 | 64/337 (19%) | ||
Lig_chan | 576..842 | CDD:278489 | 51/279 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 882..910 | 2/4 (50%) | |||
Involved in the trafficking and surface expression of NMDARs. /evidence=ECO:0000250 | 951..984 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350054 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |