DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir84a and Grin2d

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:XP_036008580.1 Gene:Grin2d / 14814 MGIID:95823 Length:1345 Species:Mus musculus


Alignment Length:672 Identity:129/672 - (19%)
Similarity:233/672 - (34%) Gaps:193/672 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 VFGVASEAGYFNNSLAWFIL-----GSGRESLPVEQLIDQLL---------------SGYR---- 154
            ||..|.|||.......||::     |.|...:|.|.|   ||               :|:|    
Mouse   258 VFRAAEEAGLTGPGYVWFMVGPQLAGGGGSGVPGEPL---LLPGGAPLPAGLFAVRSAGWRDDLA 319

  Fly   155 MGIDADITVALRGPDNASMLFYDVYRISRQANTPLIIEKKGLWTHSGG--YQKFGNFKNTWVIRR 217
            ..:.|.:.|..||   |..|..| |....:.......:.:   ||.|.  ::.|.|.  ||..|.
Mouse   320 RRVAAGVAVVARG---AQALLRD-YGFLPELGHDCRAQNR---THRGESLHRYFMNI--TWDNRD 375

  Fly   218 RNF-------------LNVT------LIGS----TVLTEKP--PGFGDMEYLADDKQ-------- 249
            .:|             :::|      ::||    |:..:.|  ..:|......||.|        
Mouse   376 YSFNEDGFLVNPSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSRYGRFLQPVDDTQHLTVATLE 440

  Fly   250 ------LQQLDPMQ--------------RKTYQL----------------------FQLVERM-- 270
                  ::..||:.              .:|:.|                      ..:::|:  
Mouse   441 ERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSLVAPRSPPPDAPRPEKRCCKGFCIDILKRLAH 505

  Fly   271 ---FNLSLAISLTDKWGELLDNGSWSGVMGQVTSREADFAVCPIRFVLDRQPYVQYSAVLHTQNI 332
               |:..|.:....|.|:.:| |.|:|::|:|..:.||.|:..:....:|...|.:|.......|
Mouse   506 TIGFSYDLYLVTNGKHGKKID-GVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGI 569

  Fly   333 HFLFRHPRRSHIKNIFF-----------EPLSNQVW--WCVLALVTGSTILLLFH----VRLERM 380
            ..:......:...:.|.           ||.|..||  ..|:.|...:..:.:|.    |...|.
Mouse   570 SVMVARSNGTVSPSAFLAFAWLMPPMSPEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRS 634

  Fly   381 LSNME----NRFSF---VWFTMLETYLQQGPANEIFRLFSTRLLISLSCIFSFMLMQFYGAFIVG 438
            |:..:    :.|:.   :|......:....|. |..|..::::::.:...|:.:.:..|.|.:..
Mouse   635 LATGKRPGGSTFTIGKSIWLLWALVFNNSVPV-ENPRGTTSKIMVLVWAFFAVIFLASYTANLAA 698

  Fly   439 SLLSE---------SARSIVNLQALYDSNLAIGM-------ENISYNFPIFTNTSNQLVRDVYVK 487
            .::.|         |.|.....|..|.. |..|.       :||..|:|   :..:.:||     
Mouse   699 FMIQEEYVDTVSGLSDRKFQRPQEQYPP-LKFGTVPNGSTEKNIRSNYP---DMHSYMVR----- 754

  Fly   488 KICKSGEHNIMSLQQGAERIIQGR---FAFHTAIDRMYRLLLELQMDEAEFCDL-----QEVMFN 544
                   :|...:::...::..|:   |.:..|:       |.....:.|.|.|     .:|...
Mouse   755 -------YNQPRVEEALTQLKAGKLDAFIYDAAV-------LNYMARKDEGCKLVTIGSGKVFAT 805

  Fly   545 LPYDSGSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAEVDLEHFAPAL 609
            ..|  |..:.|||.|:..:..|||.|.....::..::.|:.........:...:::|:::.|...
Mouse   806 TGY--GIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGICHNDKIEVMSSKLDIDNMAGVF 868

  Fly   610 FALALAMVASALVFLLELFLHW 631
            :.|.:||..|.|||..|..::|
Mouse   869 YMLLVAMGLSLLVFAWEHLVYW 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 19/83 (23%)
Lig_chan 353..602 CDD:459656 50/285 (18%)
Grin2dXP_036008580.1 Periplasmic_Binding_Protein_type1 <156..415 CDD:471960 38/168 (23%)
PBP2_iGluR_NMDA_Nr2 432..849 CDD:270436 76/443 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.