DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir84a and Grin2b

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_032197.3 Gene:Grin2b / 14812 MGIID:95821 Length:1482 Species:Mus musculus


Alignment Length:748 Identity:136/748 - (18%)
Similarity:253/748 - (33%) Gaps:204/748 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IESINTNFLELAAFEDF---LRSE--------HLSHVLVVRGDDADGDWKIECHQKLLANYRVQF 78
            |.||.|.:  ...::||   :||.        .|..||::.....|||.||:...|.|.:..:..
Mouse   168 IFSIVTTY--FPGYQDFVNKIRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPIILL 230

  Fly    79 YRPEMSANFEDLMFYGSPRTAVLVLNSEHVLVRRQVFGVASEAGYFNNSLAWFI---LGSGRESL 140
            |..:..|.:                          :|.||:..|.......|.:   :....:::
Mouse   231 YCTKEEATY--------------------------IFEVANSVGLTGYGYTWIVPSLVAGDTDTV 269

  Fly   141 PVEQLIDQLLSGY-----------RMGIDADITVALRG--------PDNASMLFYD----VYRIS 182
            |.|.....:...|           |.|| |.||.|...        |:..|..:..    :|: |
Mouse   270 PSEFPTGLISVSYDEWDYGLPARVRDGI-AIITTAASDMLSEHSFIPEPKSSCYNTHEKRIYQ-S 332

  Fly   183 RQANTPLI---IEKKGLWTHSGGYQ-----------------KFGNFKN--------TW------ 213
            ...|..||   .|.:.|.....|||                 :.|.:|:        .|      
Mouse   333 NMLNRYLINVTFEGRNLSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQMKYYVWPRMCPE 397

  Fly   214 --------------------VIRRRNFLNVTLIGSTV----------LTEKPPGF------GDME 242
                                ::...:.|:.|.:.:||          .|::.||:      |   
Mouse   398 TEEQEDDHLSIVTLEEAPFVIVESVDPLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKG--- 459

  Fly   243 YLADDKQLQQLDPMQRKTYQLFQLVERMFNLSLAISLTDKWGELLDNGSWSGVMGQVTSREADFA 307
            :..|  .|:::....:.||.|:            :....|.|:.: ||:|:|::|:|..:.|..|
Mouse   460 FCID--ILKKISKSVKFTYDLY------------LVTNGKHGKKI-NGTWNGMIGEVVMKRAYMA 509

  Fly   308 VCPIRFVLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKNIFFEPLSNQVW--WCVLALVTGSTIL 370
            |..:....:|...|.:|.......|..:......:...:.|.||.|..||  ..|:.|:..:..:
Mouse   510 VGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAV 574

  Fly   371 LLFH----VRLERMLSN----------MENRFSFVWFTMLETYLQ-QGPANEIFRLFSTRLLISL 420
            .:|.    |...|.|::          :......:|..:....:. |.|...     ::::::|:
Mouse   575 FVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGT-----TSKIMVSV 634

  Fly   421 SCIFSFMLMQFYGAFIVGSLLSESARSIVNLQALYDSNLAIGME-NISYNFPIFTNTSNQL-VRD 483
            ...|:.:.:..|.|.:...::.|  ..:..:..|.|.......: :..:.|....|.|.:. :|:
Mouse   635 WAFFAVIFLASYTANLAAFMIQE--EYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRN 697

  Fly   484 VYVKKICKSGEHN-------IMSLQQGAERIIQGRFAFHTAIDRMYRLLLELQMDEAEFCDLQEV 541
            .|.:.....|:.|       ::||:.|.    ...|.:..|:       |.......|.|.|..:
Mouse   698 NYAEMHAYMGKFNQRGVDDALLSLKTGK----LDAFIYDAAV-------LNYMAGRDEGCKLVTI 751

  Fly   542 MFNLPYDS---GSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAEVDLE 603
            .....:.|   |..:.|.|.|:..:..|:|.....|.::..:..|:.........:...:::|::
Mouse   752 GSGKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDID 816

  Fly   604 HFAPALFALALAMVASALVFLLELFLHWLPDFR 636
            :.|...:.|..||..|.:.|:.|...:|  .||
Mouse   817 NMAGVFYMLGAAMALSLITFICEHLFYW--QFR 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310 9/57 (16%)
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 19/72 (26%)
Lig_chan 353..602 CDD:459656 44/277 (16%)
Grin2bNP_032197.3 PBP1_iGluR_NMDA_NR2 33..388 CDD:380601 49/249 (20%)
PBP2_iGluR_NMDA_Nr2 403..803 CDD:270436 75/435 (17%)
NMDAR2_C 840..1482 CDD:463148 3/10 (30%)

Return to query results.
Submit another query.