DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir84a and grin2ba

DIOPT Version :10

Sequence 1:NP_649720.2 Gene:Ir84a / 40891 FlyBaseID:FBgn0037501 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001429729.1 Gene:grin2ba / 110438919 ZFINID:ZDB-GENE-090821-2 Length:1606 Species:Danio rerio


Alignment Length:741 Identity:130/741 - (17%)
Similarity:260/741 - (35%) Gaps:193/741 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IESINTNFLELAAFEDF---LRSE--------HLSHVLVVRGDDADGDWKIECHQKLLANYRVQF 78
            |.||.|.:  ...::||   :||.        .|..||::.....|||.||:...|.|.:..:..
Zfish   216 IFSIVTTY--YPGYQDFVTKIRSTIENSFVGWELEEVLLLDMSVDDGDAKIQNLLKKLQSPVILL 278

  Fly    79 YRPEMSANFEDLMFYGSPRTAVLVLNSEHVLVRRQVFGVASEAGYFNNSLAWFI---LGSGRESL 140
            |..:..||.                          :|.||...|.......|.:   :....:.:
Zfish   279 YSTKEEANI--------------------------IFQVAHSVGLTGYGYTWIVPSLVAGDADHI 317

  Fly   141 PVE---QLIDQLLSGYRMGIDADIT--VAL-----------RGP--------------------D 169
            |.|   .:|......:..|::|.:.  ||:           |||                    :
Zfish   318 PAEFPTGMISVSYDEWDYGLEARVRDGVAVIATATSTMMMDRGPHTLLKSECHGAPDKKSPMTGN 382

  Fly   170 NASMLFY---------------DVYRISRQANTPLIIEKKGLWTHSGGYQKFGNFK---NTW--- 213
            |..:|.|               |.|::..:. ..::::|:..|...|.::. |:..   :.|   
Zfish   383 NNEVLRYLMNVTFEGRNLSFSEDGYQMHPKL-VIILLDKERQWDRVGKWEN-GSLSMKYHVWPRF 445

  Fly   214 ------VIRRRNFLNVTLIGST--VLTEKPPGFGDMEYLADD---------KQLQQLDPMQRKTY 261
                  ..|..:.|::..:...  |:.|      |::.|:..         |||:.|:..|....
Zfish   446 ELYSGPEAREDDHLSIVTLEEAPFVIVE------DVDPLSGTCMRNTVPCRKQLKALNQTQDSAV 504

  Fly   262 QL--------FQLVERM-----FNLSLAISLTDKWGELLDNGSWSGVMGQVTSREADFAVCPIRF 313
            .:        ..:::::     |...|.:....|.|:.: ||:|:|::|:|..:.|..||..:..
Zfish   505 YIKRCCKGFCIDILKKIAKNVKFTYDLYLVTNGKHGKKI-NGTWNGMVGEVVLKNAHMAVGSLTI 568

  Fly   314 VLDRQPYVQYSAVLHTQNIHFLFRHPRRSHIKNIFFEPLSNQVW---WCVLALVTGSTILLLFH- 374
            ..:|...:.:|.......|..:......:...:.|.||.|..||   :.:|.||:...:.:..: 
Zfish   569 NEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWIMMFVMLLLVSAIAVFIFEYF 633

  Fly   375 --VRLERMLSN----------MENRFSFVWFTMLETYLQ-QGPANEIFRLFSTRLLISLSCIFSF 426
              |...|.|::          :......:|..:....:. |.|     |..::::::|:...|:.
Zfish   634 SPVGYNRCLADGREAGGPSFTIGKAIWLLWGLVFNNSVPVQNP-----RGTTSKIMVSVWAFFAV 693

  Fly   427 MLMQFYGAFIVGSLLSESARSIVNLQALYDSNLAIGMENIS-----YNFPIFTNTSNQL-----V 481
            :.:..|.|.:...::.|  ..:..:..|.|..    .:|.:     :.|....|.|.:.     .
Zfish   694 IFLASYTANLAAFMIQE--EYVDQVSGLSDKK----FQNPNDFSPPFRFGTVPNGSTERNIRNNY 752

  Fly   482 RDVYVKKICKSGEHNIMSLQQGAERIIQGR---FAFHTAIDRMYRLLLELQMDEAEFCDLQEVMF 543
            ||:: ..:.|..:.|::   :..|.:..|:   |.:..|:       |.......|.|.|..:..
Zfish   753 RDMH-SYMVKFHQRNVV---EALESLKTGKLDAFIYDAAV-------LNYMAGRDEGCKLVTIGS 806

  Fly   544 NLPYDS---GSVMPKGSPWREHLAHALLHFRATGLLQYNDKKWMVRRPDCSLFKTSQAEVDLEHF 605
            ...:.|   |..:.|.|.|:..:..|:|.....|.::..:..|:.........:...:::|:::.
Zfish   807 GKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGICHHEKNEVMSSQLDVDNM 871

  Fly   606 APALFALALAMVASALVFLLELFLHW 631
            |...:.|..||..|.:.|:.|...:|
Zfish   872 AGVFYMLGAAMALSLITFIAEHVFYW 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir84aNP_649720.2 ATP-sulfurylase <54..>112 CDD:460310 10/57 (18%)
Periplasmic_Binding_Protein_Type_2 <282..>355 CDD:473866 18/72 (25%)
Lig_chan 353..602 CDD:459656 45/281 (16%)
grin2baNP_001429729.1 None

Return to query results.
Submit another query.