DRSC/TRiP Functional Genomics Resources

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Protein Alignment MstProx and Tlr9

DIOPT Version :9

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_112455.2 Gene:Tlr9 / 81897 MGIID:1932389 Length:1032 Species:Mus musculus


Alignment Length:1020 Identity:217/1020 - (21%)
Similarity:356/1020 - (34%) Gaps:335/1020 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 SHLRSLTFIGFQIENLSTKPFAQFINLKRMVLT-NC--------------TVRNLTFL--RTLQK 226
            |::..|:.|..:|.:|....|....||:::.|. ||              |:...|||  |||: 
Mouse    63 SNITRLSLISNRIHHLHNSDFVHLSNLRQLNLKWNCPPTGLSPLHFSCHMTIEPRTFLAMRTLE- 126

  Fly   227 SLEHLELDIDNEVDLKY--FTNFSSLKFMKVRNYIPNKNFTALICTHKNCNFIRGINGLECPKLC 289
                       |::|.|  .|....|....|...:.:.|...|     :.|.:.|:..|      
Mouse   127 -----------ELNLSYNGITTVPRLPSSLVNLSLSHTNILVL-----DANSLAGLYSL------ 169

  Fly   290 QCLYIIDDLELNIDCSNLGLLQIPPLPIPSYGGVKLNFSNNSLSQLPTMTLPGYKLVKRLDVSRN 354
            :.|::..:......|:  |.:::.|       |..|..||                :..|.:..|
Mouse   170 RVLFMDGNCYYKNPCT--GAVKVTP-------GALLGLSN----------------LTHLSLKYN 209

  Fly   355 RLTNLSINHLPAKLDYLDVSFNEIINMGNDVIKYLRTVPIFKQTGNQWTIHCDDKPLLNFFRHLK 419
            .||.:. ..||..|:||.||:|.|:.:|.:.:..|.::.:....||  ...||..|      :..
Mouse   210 NLTKVP-RQLPPSLEYLLVSYNLIVKLGPEDLANLTSLRVLDVGGN--CRRCDHAP------NPC 265

  Fly   420 LIIRMKSAEMKPMFLHSLTELPKGFLKFLGKHFI---WL-GVRKQEYYLINEEQLLQSM-H---- 475
            :....||..:.|...|.|:.|....||....|.:   |. |:.......::|..|.:|: |    
Mouse   266 IECGQKSLHLHPETFHHLSHLEGLVLKDSSLHTLNSSWFQGLVNLSVLDLSENFLYESITHTNAF 330

  Fly   476 ------RKLN-----------------------------NLNTIM--SIYKY-MEW--------- 493
                  ||||                             |:|.|.  .:.|| :.|         
Mouse   331 QNLTRLRKLNLSFNYRKKVSFARLHLASSFKNLVSLQELNMNGIFFRLLNKYTLRWLADLPKLHT 395

  Fly   494 LHRKLIFVN-------------REYDLFYIR-----QMAAPCPHKCECCYSRDSLILKID----- 535
            ||.::.|:|             |..||...|     .::...|.:.:.....:  :|..|     
Mouse   396 LHLQMNFINQAQLSIFGTFRALRFVDLSDNRISGPSTLSEATPEEADDAEQEE--LLSADPHPAP 458

  Fly   536 ------------CRNKFVYNFPDIVARNSRLMGKQ----NMSSPMELHLSKNNI----------- 573
                        |:|   :.|...::||:.:..|.    |:|....|.||.|:|           
Mouse   459 LSTPASKNFMDRCKN---FKFTMDLSRNNLVTIKPEMFVNLSRLQCLSLSHNSIAQAVNGSQFLP 520

  Fly   574 -SNITI----------------AMLPKELRFLDLRFN-------------NLVT----------- 597
             :|:.:                :.|| :|:.|||.:|             :.||           
Mouse   521 LTNLQVLDLSHNKLDLYHWKSFSELP-QLQALDLSYNSQPFSMKGIGHNFSFVTHLSMLQSLSLA 584

  Fly   598 ---LDDKVLSYLKKNSIK-TKLSGN------------------------------------PWNC 622
               :..:|.|:|..||:: ...|||                                    |.|.
Mouse   585 HNDIHTRVSSHLNSNSVRFLDFSGNGMGRMWDEGGLYLHFFQGLSGLLKLDLSQNNLHILRPQNL 649

  Fly   623 D--CKSRSVLSILRDHEPLEYDVTLKRC--NISPTDCPDVCVCCLDNLTWPSFIVDCRGEGLLQM 683
            |  .||..:|| |||:....::.|....  |:...|.....:..|.|.|.|:       ..|||.
Mouse   650 DNLPKSLKLLS-LRDNYLSFFNWTSLSFLPNLEVLDLAGNQLKALTNGTLPN-------GTLLQK 706

  Fly   684 PSLSSR----------VTYVDLRNNNLT--ALSQKNRSSIENRSLKLHLLD---NPWSCSCNDIE 733
            ..:||.          ...|:|:..||:  .|...:||......:.|.:||   ||..|:|. ..
Mouse   707 LDVSSNSIVSVVPAFFALAVELKEVNLSHNILKTVDRSWFGPIVMNLTVLDVRSNPLHCACG-AA 770

  Fly   734 KINFMKSVSSSIVDFTE-IKCSNGEKL----VSINQHIVCPSDLFYYLALAISLVATIIALNFLI 793
            .::.:..|.:.:..... :||.:..:|    :......:|..::..:....:||:|  :|:..::
Mouse   771 FVDLLLEVQTKVPGLANGVKCGSPGQLQGRSIFAQDLRLCLDEVLSWDCFGLSLLA--VAVGMVV 833

  Fly   794 WFRQPVL-------VWFYEHGVCLS----LSAKRELDKDKRFDAFLAFTHKDEALLE----EFVD 843
                |:|       ||:..| :||:    |:..|...:...:|||:.|.....|:.:    |...
Mouse   834 ----PILHHLCGWDVWYCFH-LCLAWLPLLARSRRSAQTLPYDAFVVFDKAQSAVADWVYNELRV 893

  Fly   844 RLE--RGRPRFQLCFYLRDWLAGESIPDCIGQSIKDSRRIIVLMTENFMNSTWGRLEFRLALHAT 906
            |||  |||...:||...||||.|:::.:.:..||..||:.:.::......|...|..|.||....
Mouse   894 RLEERRGRRALRLCLEDRDWLPGQTLFENLWASIYGSRKTLFVLAHTDRVSGLLRTSFLLAQQRL 958

  Fly   907 SRDRCKRLI-VVLYPNVKNFDSLDSELRTYMAFNTYLERSHPNFW 950
            ..||...:: |:|.|        |:....|:.....|.|....||
Mouse   959 LEDRKDVVVLVILRP--------DAHRSRYVRLRQRLCRQSVLFW 995

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 leucine-rich repeat 325..345 CDD:275378 3/19 (16%)
leucine-rich repeat 346..367 CDD:275378 6/20 (30%)
leucine-rich repeat 563..583 CDD:275378 7/47 (15%)
leucine-rich repeat 585..610 CDD:275378 10/51 (20%)
leucine-rich repeat 611..622 CDD:275378 4/47 (9%)
TIR 823..960 CDD:214587 39/135 (29%)