DRSC/TRiP Functional Genomics Resources

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Protein Alignment MstProx and TLR3

DIOPT Version :9

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_003256.1 Gene:TLR3 / 7098 HGNCID:11849 Length:904 Species:Homo sapiens


Alignment Length:1085 Identity:239/1085 - (22%)
Similarity:379/1085 - (34%) Gaps:358/1085 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TIPDDYCETYCGG------ICNDTVASKTCDREAYDYIATNEYHLIMRDGHLEVNWKIPD---PN 61
            |:|   |..:.||      :|..:....|...|..|.            .||::. ::||   .|
Human     4 TLP---CIYFWGGLLPFGMLCASSTTKCTVSHEVADC------------SHLKLT-QVPDDLPTN 52

  Fly    62 IFIISPISKENRLKLNELIVSDTSYPIRAVDYLRQLGVETVTRFENQINS----FKVIER-DVHY 121
            |.:::       |..|:               ||:|.....||: :|:.|    |..|.: :...
Human    53 ITVLN-------LTHNQ---------------LRRLPAANFTRY-SQLTSLDVGFNTISKLEPEL 94

  Fly   122 INGPKSLKIIIQSNLYLNEIIEYINKT---TDNVNE--IIINAYKTVENQQ-IALDNLIFNGKSH 180
            ......||::   ||..||:.:..:||   ..|:.|  ::.|:.:.::|.. :...|||....||
Human    95 CQKLPMLKVL---NLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSH 156

  Fly   181 L-RSLTFIGFQIENLSTKPFAQFINLKRMVLTNCTVRNLTFLRTLQKSLEHLELDIDNEVDLKYF 244
            . .|.|.:|.|:         |..||:.::|:|..:          ::|:..||||        |
Human   157 NGLSSTKLGTQV---------QLENLQELLLSNNKI----------QALKSEELDI--------F 194

  Fly   245 TNFSSLKFM-----KVRNYIPNKNFTALICTHKNCNFIRGINGL----------ECPKLCQCLYI 294
            .| ||||.:     :::.:.|.       |.|.    |..:.||          ...|||     
Human   195 AN-SSLKKLELSSNQIKEFSPG-------CFHA----IGRLFGLFLNNVQLGPSLTEKLC----- 242

  Fly   295 IDDLEL-NIDCSNLGLLQIPPLPIPSYGGVKLNFSNNSLSQLPTMTLPGYKL--VKRLDVSRNRL 356
               ||| |....||.|                  ||:.||.....|..|.|.  :..||:|.|.|
Human   243 ---LELANTSIRNLSL------------------SNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL 286

  Fly   357 T---NLSINHLPAKLDYLDVSFNEI----------------INMGNDVIKY---LRTVPIFKQTG 399
            .   |.|...|| :|:|..:.:|.|                :|:.....|.   |.::|......
Human   287 NVVGNDSFAWLP-QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFS 350

  Fly   400 NQWTIHC--------DDKP-----------------LLNFFRHLKLIIRMKSAEMKPMFLHSLTE 439
            .|| :.|        :|.|                 |.|.|..|:.:.......:....||.|..
Human   351 FQW-LKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNL 414

  Fly   440 LPKGFLKFLGKHFIWLGVRKQEYYLINE--EQLLQSMHRKLNNLNTI-MSIYKYMEWLHRKLIFV 501
            ......|.....|.|||..:.....:||  ::|.....|.|.|:..| :|..||::         
Human   415 TKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQ--------- 470

  Fly   502 NREYDLFYIRQMAAPCPHKCECCYSRDSLILKIDCRNKFVYNFPDIVARNSRLMGKQNMSSPME- 565
                                   .:|:|..|        |.:...::.|...|....:..||.: 
Human   471 -----------------------LTRNSFAL--------VPSLQRLMLRRVALKNVDSSPSPFQP 504

  Fly   566 ------LHLSKNNISNITIAMLP--KELRFLDLRFNNLVTLDDKVLSYLKKNSIKTKLSGNPWNC 622
                  |.||.|||:||...||.  ::|..|||:.|||..|            .|....|.|...
Human   505 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARL------------WKHANPGGPIYF 557

  Fly   623 DCKSRSVLSILR------DHEPLEYDVTLKRCNISPTDCPDVCVCCLDNL-TWPSFIVDCRGEGL 680
             .|..|.|.||.      |..|:|....|....|....        |:|| |.|:.:.:      
Human   558 -LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG--------LNNLNTLPASVFN------ 607

  Fly   681 LQMPSLSSRVTYVDLRNNNLTALSQKNRSSIENRSLKLHLLDNPWSCSCNDIE-KINFMKSVSSS 744
             ...||.|    ::|:.|.:|::.:|..........:|.:..||:.|:|..|. .:|::....::
Human   608 -NQVSLKS----LNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTN 667

  Fly   745 IVDFTEIKCSNGEKLVSINQHIVC-----------------------PSDLFYYLALAISLVATI 786
            |.:              ::.|.:|                       |.:||:.:..:|.|:...
Human   668 IPE--------------LSSHYLCNTPPHYHGFPVRLFDTSSCKDSAPFELFFMINTSILLIFIF 718

  Fly   787 IALNFLIWFRQPVLVWFYEHGVCLSLSAKRELDKD-KRFD--AFLAFTHKDEALLEEFVDRLERG 848
            |.|  ||.|....:.:::...|...|..| |:|:. ::|:  |::...:||:..:.|....:|:.
Human   719 IVL--LIHFEGWRISFYWNVSVHRVLGFK-EIDRQTEQFEYAAYIIHAYKDKDWVWEHFSSMEKE 780

  Fly   849 RPRFQLCFYLRDWLAGESIPDCIGQSIKDSRRIIVLMTENFMNSTWGRLEFRLALHATSRDRCKR 913
            ....:.|...||:.||....:.|..|||.||:||.::|.                |......|||
Human   781 DQSLKFCLEERDFEAGVFELEAIVNSIKRSRKIIFVITH----------------HLLKDPLCKR 829

  Fly   914 LIV---VLYPNVKNFDSL---------DSELRTYMAFNTYLERSH 946
            ..|   |.....:|.||:         |.:|...:.....:.:||
Human   830 FKVHHAVQQAIEQNLDSIILVFLEEIPDYKLNHALCLRRGMFKSH 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 leucine-rich repeat 325..345 CDD:275378 6/19 (32%)
leucine-rich repeat 346..367 CDD:275378 9/23 (39%)
leucine-rich repeat 563..583 CDD:275378 11/28 (39%)
leucine-rich repeat 585..610 CDD:275378 8/24 (33%)
leucine-rich repeat 611..622 CDD:275378 3/10 (30%)
TIR 823..960 CDD:214587 33/138 (24%)
TLR3NP_003256.1 LRRNT 28..50 CDD:396168 7/34 (21%)
leucine-rich repeat 33..52 CDD:275380 6/31 (19%)
LRR 1 52..73 7/42 (17%)
leucine-rich repeat 53..76 CDD:275380 8/45 (18%)
PLN00113 72..>542 CDD:215061 133/580 (23%)
LRR 2 76..97 4/20 (20%)
leucine-rich repeat 77..100 CDD:275380 3/22 (14%)
LRR 3 100..121 8/23 (35%)
leucine-rich repeat 101..124 CDD:275380 8/25 (32%)
LRR 4 124..145 4/20 (20%)
leucine-rich repeat 125..148 CDD:275380 3/22 (14%)
LRR 5 148..168 8/19 (42%)
leucine-rich repeat 149..198 CDD:275380 20/76 (26%)
LRR 6 172..193 7/30 (23%)
LRR 7 198..219 5/27 (19%)
leucine-rich repeat 199..249 CDD:275380 15/68 (22%)
LRR 8 222..244 5/29 (17%)
LRR 9 249..270 8/38 (21%)
leucine-rich repeat 250..275 CDD:275380 10/42 (24%)
LRR 10 275..296 7/20 (35%)
leucine-rich repeat 276..299 CDD:275380 9/23 (39%)
LRR 11 299..320 4/20 (20%)
leucine-rich repeat 300..321 CDD:275380 4/20 (20%)
LRR 12 323..344 3/20 (15%)
LRR 13 356..377 3/20 (15%)
leucine-rich repeat 357..380 CDD:275380 2/22 (9%)
LRR 14 380..400 4/19 (21%)
leucine-rich repeat 381..406 CDD:275380 4/24 (17%)
LRR 15 408..429 5/20 (25%)
leucine-rich repeat 409..432 CDD:275380 7/22 (32%)
LRR 16 432..454 3/21 (14%)
leucine-rich repeat 433..457 CDD:275380 5/23 (22%)
leucine-rich repeat 458..481 CDD:275380 8/62 (13%)
LRR 17 465..486 6/60 (10%)
leucine-rich repeat 482..507 CDD:275380 4/24 (17%)
LRR 18 507..528 10/20 (50%)
leucine-rich repeat 508..531 CDD:275380 10/22 (45%)
LRR 19 531..552 9/32 (28%)
leucine-rich repeat 532..563 CDD:275380 12/43 (28%)
LRR_8 562..622 CDD:404697 19/78 (24%)
LRR 20 563..584 6/20 (30%)
leucine-rich repeat 564..585 CDD:275380 6/20 (30%)
LRR 21 587..608 6/35 (17%)
leucine-rich repeat 588..611 CDD:275380 6/37 (16%)
LRR 22 611..632 7/24 (29%)
leucine-rich repeat 612..630 CDD:275380 6/21 (29%)
leucine-rich repeat 637..659 CDD:275380 6/21 (29%)
LRRCT 645..697 CDD:214507 9/65 (14%)
Tlr3_TMD 698..730 CDD:407816 10/33 (30%)
TIR 755..900 CDD:214587 32/136 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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