DRSC/TRiP Functional Genomics Resources

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Protein Alignment MstProx and 18w

DIOPT Version :9

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_476814.1 Gene:18w / 37277 FlyBaseID:FBgn0004364 Length:1385 Species:Drosophila melanogaster


Alignment Length:1074 Identity:236/1074 - (21%)
Similarity:396/1074 - (36%) Gaps:336/1074 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 MRDGHLEVN--WKIPDPNIFIISPISKENRLKLNELIVSDTSYPIRAVDYLRQLGVETVTRFENQ 108
            :|:.||:.|  :::|           |....:|.:|:|.|.|                    .||
  Fly   285 LRELHLQGNDLYELP-----------KGLLHRLEQLLVLDLS--------------------GNQ 318

  Fly   109 INSFKVIERDVHYIN-----------------------GPKSLKIIIQSNLYLNEIIEYINKTTD 150
            :.|        |:::                       |.|:.|     .||..:|::..|.:..
  Fly   319 LTS--------HHVDNSTFAGLIRLIVLNLSNNALTRIGSKTFK-----ELYFLQILDMRNNSIG 370

  Fly   151 NVNE------IIINAYKTVENQQIALDNLIFNGKSHLRSLTFIGFQIENLSTKPFAQFINLKRMV 209
            ::.|      ..::.....||:...|||.||||...|..||.....:..:.::.|....:||.:.
  Fly   371 HIEEGAFLPLYNLHTLNLAENRLHTLDNRIFNGLYVLTKLTLNNNLVSIVESQAFRNCSDLKELD 435

  Fly   210 LTNC-------TVRNLTFLRTLQ-----------------KSLEHLELDIDNEVDLKYFTNFSSL 250
            |::.       .|::|:.|:||.                 ..|..|.| |||.:.......|..|
  Fly   436 LSSNQLTEVPEAVQDLSMLKTLDLGENQISEFKNNTFRNLNQLTGLRL-IDNRIGNITVGMFQDL 499

  Fly   251 KFMKVRNYIPN-----------KNFTALICTHKNCNFIRGINGLECPKLCQCLYIIDDLELNIDC 304
            ..:.|.|...|           || |.:.....:.||:..|||: ...|...|:      ||:..
  Fly   500 PRLSVLNLAKNRIQSIERGAFDKN-TEIEAIRLDKNFLTDINGI-FATLASLLW------LNLSE 556

  Fly   305 SNLGLLQIPPLPIPSYGGVK-LNFSNNSLSQLPTMTLPGYKL-----VKRLDVSRNRLTNLSINH 363
            ::|.......:|    ..:| |:...|.:..|...    |||     |..||.|.||:|.:....
  Fly   557 NHLVWFDYAFIP----SNLKWLDIHGNYIEALGNY----YKLQEEIRVTTLDASHNRITEIGAMS 613

  Fly   364 LPAKLDYLDVSFNEI----------------INMGNDVIKYL-------------RTVPIFKQTG 399
            :|..::.|.::.|.|                :::..:|:..:             :.||.|...|
  Fly   614 VPNSIELLFINNNIIGQIQANTFVDKTRLARVDLYANVLSKISLNALRVAPVSAEKPVPEFYLGG 678

  Fly   400 NQWTIHCDDKPLLNFFRHLKLIIRMKSAEMKPMFLHSLT--ELPKGFLKFLGKHFIWLGVRKQEY 462
            |.:...|..:.|..                    :::||  :.|         |.:.||      
  Fly   679 NPFECDCSMEWLQR--------------------INNLTTRQHP---------HVVDLG------ 708

  Fly   463 YLINEEQLLQSMH----RKLNNLNTIMSIYKYMEWLHRKLIFVNREYDLFYIRQMAAPCPHKCEC 523
               |.|.|:....    |.|.:|:....:.||..  |........||:..   :....||..|.|
  Fly   709 ---NIECLMPHSRSAPLRPLASLSASDFVCKYES--HCPPTCHCCEYEQC---ECEVICPGNCSC 765

  Fly   524 CYSRDSLILKIDCRNKFVYNFPDIVARNSRLMGKQNMSSPMELHLSKNNISNITIAMLP--KELR 586
            .:........:||..:      |:.|..:|:  .|::|   :|:|..||:..:.:..|.  :.||
  Fly   766 FHDATWATNIVDCGRQ------DLAALPNRI--PQDVS---DLYLDGNNMPELEVGHLTGRRNLR 819

  Fly   587 FLDLRFNNLVTLDDKVLS--------YLKKNSIKTKLSGNPWNCDCKSRSVLSILRD---HEPLE 640
            .|.|..:||:||.:..|:        :|:.|.: |.|.|..:      || |.:||:   |..: 
  Fly   820 ALYLNASNLMTLQNGSLAQLVNLRVLHLENNKL-TALEGTEF------RS-LGLLRELYLHNNM- 875

  Fly   641 YDVTLKRCNISPTDCPDVCVCCLDNLTWPSFIVDCRGEGLLQMPSLSSRVTYVDLRNNNLTALSQ 705
                               :..:.|.|:.              |.:|..|..:|  ||.|::|..
  Fly   876 -------------------LTHISNATFE--------------PLVSLEVLRLD--NNRLSSLPH 905

  Fly   706 -KNRSSIENRSLKLHLLDNPWSCSCNDIEKI-NFMKSVSSSIVDFTEIKC--------------- 753
             :.|.|::.    |.|..|.|||.|..:.:: .|:...:..:.|..:|.|               
  Fly   906 LQYRHSLQG----LTLGRNAWSCRCQQLRELAQFVSDNAMVVRDAHDIYCLDAGIKRELELIGNL 966

  Fly   754 SNG----EKLVSINQHIVCPSDL-----FYYLALAISLVATIIALNFLIWFRQPVLVWFYEH-GV 808
            :||    :.|.:...:|....||     ...||..:.|:..::.|..:..||:.|.:|.:.| ||
  Fly   967 ANGPDCSDLLDASASNISSSQDLAGGYRLPLLAAVLVLIFLVVVLIIVFVFRESVRMWLFAHYGV 1031

  Fly   809 CLSLSAKRELDKDKRFDAFLAFTHKDEALLEEFVDR-----LERGRPRFQLCFYLRDWLAGESIP 868
              .:...|..|..|.:||.:..:.||    .|||.|     ||.|||.|:||...|| |..::..
  Fly  1032 --RVCEPRFEDAGKLYDAIILHSEKD----YEFVCRNIAAELEHGRPPFRLCIQQRD-LPPQASH 1089

  Fly   869 DCIGQSIKDSRRIIVLMTENFMNSTWGRLEFRLALHATSRDRCKRLIVVLYPNVKNFDSLDSELR 933
            ..:.:..:.||:||:::|.|.:.:.|.|:|||.|.|.:.|...::|:::      ...|:.:|..
  Fly  1090 LQLVEGARASRKIILVLTRNLLATEWNRIEFRNAFHESLRGLAQKLVII------EETSVSAEAE 1148

  Fly   934 TYMAFNTYLERSHPN--------FWNKLIYSMPL 959
            .....:.||:....|        ||.||.|::|:
  Fly  1149 DVAELSPYLKSVPSNRLLTCDRYFWEKLRYAIPI 1182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 leucine-rich repeat 325..345 CDD:275378 4/19 (21%)
leucine-rich repeat 346..367 CDD:275378 8/20 (40%)
leucine-rich repeat 563..583 CDD:275378 5/21 (24%)
leucine-rich repeat 585..610 CDD:275378 10/32 (31%)
leucine-rich repeat 611..622 CDD:275378 3/10 (30%)
TIR 823..960 CDD:214587 45/150 (30%)
18wNP_476814.1 leucine-rich repeat 66..91 CDD:275380
leucine-rich repeat 92..115 CDD:275380
LRR_8 115..181 CDD:290566
leucine-rich repeat 116..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..201 CDD:275380
LRR_RI 210..464 CDD:238064 44/222 (20%)
leucine-rich repeat 212..236 CDD:275380
LRR_8 235..295 CDD:290566 4/9 (44%)
leucine-rich repeat 237..260 CDD:275380
leucine-rich repeat 261..284 CDD:275380
LRR_8 283..345 CDD:290566 15/98 (15%)
leucine-rich repeat 285..308 CDD:275380 7/33 (21%)
leucine-rich repeat 309..334 CDD:275380 8/52 (15%)
LRR_8 334..393 CDD:290566 10/63 (16%)
leucine-rich repeat 335..358 CDD:275380 4/27 (15%)
leucine-rich repeat 359..382 CDD:275380 3/22 (14%)
LRR_8 382..441 CDD:290566 16/58 (28%)
leucine-rich repeat 383..406 CDD:275380 9/22 (41%)
leucine-rich repeat 407..430 CDD:275380 4/22 (18%)
LRR_8 431..488 CDD:290566 14/57 (25%)
leucine-rich repeat 431..451 CDD:275380 4/19 (21%)
leucine-rich repeat 454..477 CDD:275380 3/22 (14%)
LRR_8 477..559 CDD:290566 23/90 (26%)
leucine-rich repeat 478..499 CDD:275380 7/21 (33%)
leucine-rich repeat 502..525 CDD:275380 5/23 (22%)
leucine-rich repeat 526..548 CDD:275380 6/22 (27%)
leucine-rich repeat 590..617 CDD:275380 9/26 (35%)
leucine-rich repeat 618..641 CDD:275380 3/22 (14%)
leucine-rich repeat 642..689 CDD:275380 7/46 (15%)
LRRCT 679..736 CDD:214507 15/94 (16%)
leucine-rich repeat 775..796 CDD:275380 7/31 (23%)
LRR_8 797..852 CDD:290566 16/54 (30%)
leucine-rich repeat 797..817 CDD:275380 5/19 (26%)
leucine-rich repeat 818..841 CDD:275380 9/22 (41%)
LRR_8 841..900 CDD:290566 19/102 (19%)
leucine-rich repeat 842..865 CDD:275380 8/30 (27%)
LRR_4 866..907 CDD:289563 13/76 (17%)
leucine-rich repeat 866..889 CDD:275380 6/56 (11%)
leucine-rich repeat 890..911 CDD:275380 7/22 (32%)
TIR 1045..1183 CDD:214587 45/149 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I4673
eggNOG 1 0.900 - - E2759_KOG4641
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.820

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