DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MstProx and Tlr7

DIOPT Version :9

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:XP_017457568.1 Gene:Tlr7 / 317468 RGDID:1563357 Length:1068 Species:Rattus norvegicus


Alignment Length:1070 Identity:222/1070 - (20%)
Similarity:394/1070 - (36%) Gaps:332/1070 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YCGGIC---NDTVASKTCDREAYDYIATNEYHLIMRDGHLEVNWKIPDPNIF-------IISPIS 69
            |.|..|   |....|.:.:::|: .:..|...|.::|.::.....|..||:.       ||..|.
  Rat   196 YLGQNCYYRNPCNVSYSIEKDAF-LVMKNLKVLSLKDNNVTAVPTILPPNLLELYLYNNIIKRIQ 259

  Fly    70 KENRLKLNELIVSDTS----------YPI-------------RAVDYLRQLGVETVTRFENQINS 111
            :.:..||::|.|.|.|          ||.             .|.|.|.:|   .|.|..:  ||
  Rat   260 EHDFNKLSQLQVLDLSGNCPRCYNVPYPCTPCENNSPLQIHDNAFDSLTEL---KVLRLHS--NS 319

  Fly   112 FKVIERDVHYINGPKSLKIIIQSNLYLNEIIE---YINKTTDNVN-EIIINAYKTVENQQIALDN 172
            .:.:..:  :.....:|:.:..|..||...||   ::|...:.|. ::..|....|.:..|.|.:
  Rat   320 LQHVPAE--WFKNMSNLQELDLSQNYLAREIEEAKFLNSLPNLVQLDLSFNYELQVYHASITLPH 382

  Fly   173 LIFNGKSHLRSLTFIGFQIENLSTKPFAQFINLKRMVLTNCTVRNLTFLRTLQKSLEHLELDIDN 237
                   .|.|||    :::||..|.:. |..||...|:  .:.||:.|..|......:::    
  Rat   383 -------SLSSLT----KLKNLYIKGYV-FKELKDSSLS--VLHNLSNLEVLDLGTNFIKI---- 429

  Fly   238 EVDLKYFTNFSSLKF--MKVRNYIPNKNFTAL-ICTH-------------------------KNC 274
             .||..|..|.:|||  :.|....|::....: :|.:                         ::|
  Rat   430 -ADLNIFQQFENLKFIDLSVNKISPSEESREVGLCPNAQTSVDWHGPQVLEALHYFRYDEYARSC 493

  Fly   275 NFIRGINGLECPKLCQCLYIIDDLELNIDCSNLG---------LLQIPPLPIPSYGGVK-LNFSN 329
            .|    ...|.|..         |.||.||...|         :..|.|........:| ||.|.
  Rat   494 RF----KNKEPPTF---------LPLNADCHTYGKTLDLSRNNIFFIKPSDFKHLSFLKCLNLSG 545

  Fly   330 NSLSQLPTMTLPGYKL-----VKRLDVSRNRLTNLSINHLPAKLDYLDVSFNEIINMGNDVIKYL 389
            |::.|    ||.|.:|     ::.||.|.|||..|           ...:|.|:.|:  :::...
  Rat   546 NAIGQ----TLNGSELQPLRELRYLDFSNNRLDLL-----------YSTAFEELQNL--EILDLS 593

  Fly   390 RTVPIFKQTGNQWTIHCDDKPLLNF---FRHL-KLIIR---MKSAEMKPMFLHSLTELPKGFLKF 447
            .....|:..|   ..|     :|||   .||| ||::.   :.::..:.|...||.     .|:|
  Rat   594 SNSHYFQAEG---ITH-----MLNFTKKLRHLEKLMMNDNDISTSASRTMESESLR-----VLEF 645

  Fly   448 LGKHFIWLGVRKQEYYLINEEQLLQSMHRKLNNLNTIMSIYKYMEWLHRKLIFVNREYDLFYIRQ 512
            .|.|                   |..:.|..:|        :|:::....|   |.|        
  Rat   646 RGNH-------------------LDVLWRDGDN--------RYLDFFKNLL---NLE-------- 672

  Fly   513 MAAPCPHKCECCYSRDSLILKIDCRNKFVYNFPDIVARNSRLMG-----KQNMSSPMELHLSKNN 572
                     |...||:||                    ||...|     ..|:::   |.|:||.
  Rat   673 ---------ELDISRNSL--------------------NSVPPGVFEGMPPNLTT---LSLAKNG 705

  Fly   573 ISNITIAMLP--KELRFLDLRFNNLVTLDDKVLSYLKKNSIKTKLSGNPWNCDCKSRSVLSILRD 635
            :.:.:...|.  |.|:.|||..|.|.|:..::.                 ||   |:|:..::.:
  Rat   706 LRSFSWGRLQLLKHLKNLDLSHNQLTTVPARLA-----------------NC---SKSLTKLILN 750

  Fly   636 HEPLEYDVTLKRCNISPTDCPDVCVCCLDNLTWPSFIVDCRGEGLLQMPSLSSRVTYVDLRNNNL 700
            |..:.                        .|| ..|:.|.     ||:       .|:|:.:|.:
  Rat   751 HNQIR------------------------QLT-KYFLEDA-----LQL-------RYLDISSNKI 778

  Fly   701 TALSQKN-RSSIENRSLKLHLLDNPWSCSCNDIEKINFMKSVSSSIVDF-TEIKCS-----NGEK 758
            ..:.:.: ..::.|....|.|..|.:.|:|:.:..:.::.....:|... |::.|:     .|:.
  Rat   779 QVIQKTSFPENVLNNLNMLLLHHNRFLCNCDAVWFVWWVNHTDVTIPYLATDVTCAGPGAHKGQS 843

  Fly   759 LVSINQHIVCPSDLFYYLALAISLVATIIAL------NFLIWFRQPVLVWFYEHGVCLSLSAKRE 817
            ::|::.: .|..||...:..::|:.:.:..:      :...|.     :|:..:.....:...:.
  Rat   844 VISLDLY-TCELDLTNLILFSVSISSVLFLMIVMTTSHLFFWD-----MWYIYYFWKAKIKGYQH 902

  Fly   818 LDK-DKRFDAFLAFTHKDEA----LLEEFVDRLERGRPR-FQLCFYLRDWLAGESIPDCIGQSIK 876
            |.. :..:|||:.:..|:.|    :|:|.|.:||..|.: |.||...||||.|:.:.:.:.|||:
  Rat   903 LQSMESCYDAFIVYDTKNSAVTEWVLQELVVKLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQ 967

  Fly   877 DSRRIIVLMTENFMNSTWGRLEFRLALHATSRDRCKRLIVVLYPNVKNFDSLDSELRTYMAFNTY 941
            .||:.:.:||:.:..:...::.|.|: |....|....:|::::.......|...:||..:..::.
  Rat   968 LSRKTVFVMTQKYAKTESFKMAFYLS-HQRLMDEKVDVIILIFLEKPLQKSKFLQLRKRLCSSSV 1031

  Fly   942 LE-----RSHPNFW----------NKLIYS 956
            ||     ::||.||          |.:.||
  Rat  1032 LEWPTNPQAHPYFWQCLKNALTTDNHVAYS 1061

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 leucine-rich repeat 325..345 CDD:275378 8/19 (42%)
leucine-rich repeat 346..367 CDD:275378 7/20 (35%)
leucine-rich repeat 563..583 CDD:275378 5/21 (24%)
leucine-rich repeat 585..610 CDD:275378 7/24 (29%)
leucine-rich repeat 611..622 CDD:275378 0/10 (0%)
TIR 823..960 CDD:214587 43/154 (28%)
Tlr7XP_017457568.1 leucine-rich repeat 66..87 CDD:275380
LRR_8 93..157 CDD:290566
leucine-rich repeat 109..146 CDD:275380
leucine-rich repeat 147..191 CDD:275380
leucine-rich repeat 192..223 CDD:275380 6/27 (22%)
LRR_8 222..277 CDD:290566 15/54 (28%)
LRR_RI 223..472 CDD:238064 62/274 (23%)
leucine-rich repeat 224..244 CDD:275380 3/19 (16%)
leucine-rich repeat 245..268 CDD:275380 5/22 (23%)
leucine-rich repeat 269..309 CDD:275380 9/39 (23%)
LRR_8 308..368 CDD:290566 13/66 (20%)
leucine-rich repeat 310..333 CDD:275380 5/29 (17%)
leucine-rich repeat 334..359 CDD:275380 7/24 (29%)
leucine-rich repeat 370..389 CDD:275380 7/29 (24%)
leucine-rich repeat 390..416 CDD:275380 9/28 (32%)
leucine-rich repeat 417..440 CDD:275380 6/27 (22%)
LRR_8 515..573 CDD:290566 16/61 (26%)
leucine-rich repeat 515..537 CDD:275380 2/21 (10%)
LRR_RI 532..778 CDD:238064 81/402 (20%)
leucine-rich repeat 538..562 CDD:275380 10/27 (37%)
LRR_8 561..627 CDD:290566 21/86 (24%)
leucine-rich repeat 563..586 CDD:275380 9/33 (27%)
leucine-rich repeat 587..616 CDD:275380 6/38 (16%)
leucine-rich repeat 617..639 CDD:275380 4/21 (19%)
LRR_8 639..706 CDD:290566 26/141 (18%)
leucine-rich repeat 640..670 CDD:275380 10/64 (16%)
leucine-rich repeat 671..695 CDD:275380 9/60 (15%)
LRR_8 694..754 CDD:290566 19/82 (23%)
leucine-rich repeat 696..719 CDD:275380 5/25 (20%)
leucine-rich repeat 720..743 CDD:275380 10/42 (24%)
leucine-rich repeat 768..786 CDD:275380 3/24 (13%)
TIR 909..1054 CDD:214587 40/145 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.