DRSC/TRiP Functional Genomics Resources

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Protein Alignment MstProx and Tlr5

DIOPT Version :10

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_001139300.1 Gene:Tlr5 / 289337 RGDID:631351 Length:871 Species:Rattus norvegicus


Alignment Length:869 Identity:178/869 - (20%)
Similarity:326/869 - (37%) Gaps:231/869 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 RDVHYINGPKSLKIIIQSN----LYLNEIIEYINKTTDNVNEIIINAYKTVENQQIALDNLIFNG 177
            ||.::.|.....::.:.:|    |:|:...:.::..:| :|......:...|::...|..     
  Rat   149 RDAYFRNLNSLARLDLSANEIHSLHLHSSFQELSSLSD-INFSFNRIFTLCEDELQPLQG----- 207

  Fly   178 KSHLRSLTFIGFQIENLSTKPFAQFINLKRMVLTNCTVRNLTFLRTLQKSLEHLELDIDNEVDLK 242
                |:|:|.|.:..:|.::.|..:        ..|  ||.  ||.::  ||.|:|. :|.....
  Rat   208 ----RTLSFFGLKSTSLFSRVFVDW--------EAC--RNP--LRGIR--LETLDLS-ENGWTAA 253

  Fly   243 YFTNFSSLKFMKVRNYIPNKNFTALICTHKNCNFIRGINGLECPKLCQCLYIIDDLELNIDCSNL 307
            ...|||        :.|...:.::||.|:.......|...::.|.......:.....|.:|.|:.
  Rat   254 ILGNFS--------HTIQGSHISSLILTYHIMGSGFGFQNIKDPDQSTFASLARSSVLQLDLSHG 310

  Fly   308 GLLQIPPLPIPSYGGV-KLNFSNNSLSQLPTMTLPGYKLVKRLDVSRN---RLTNLSINHLPAKL 368
            .:..:.|....:...: |||.:.|.::::......|...::.|::|.|   .|.|.:...||: :
  Rat   311 YIFSLNPRLFETLKDLKKLNLAFNKINKISDYAFHGLDSLQILNLSYNLLGELYNSNFYGLPS-I 374

  Fly   369 DYLDVSFNEIINMGNDVIKYLRTVPIFKQTGNQWTIHCDDKPLLNFFRHLKLIIRMKSAEMKPMF 433
            .|||:..|.|..:.:...:.|:.:.......|.                ||.|..:.|.:|..:.
  Rat   375 AYLDLQRNHIGIIQDRTFRLLKKLQTLDLRDNA----------------LKTIGFIPSVQMVLLG 423

  Fly   434 LHSLTELPKGFLKFLGKHFIWLGVRKQE-----YYLINEEQLLQSMHRKLNNLNTIMSI-YKYME 492
            .:.||.||  .::|.. :||.|.....|     |:|:.... ||.:....|.|::..:: |...:
  Rat   424 SNKLTHLP--HVRFTA-NFIELSENGLENLSDLYFLLRIPG-LQFLILNQNRLSSCSNVDYAPSQ 484

  Fly   493 WLHRKLIFVNREYDLFYIRQMAAPCPHKCECCY------SRDSLILKIDCRNKFVYNF--PDIVA 549
            .|..:.:|:...     :.|:|    .:...|:      ||    |:|...|....||  |.|. 
  Rat   485 NLSLEQLFLAEN-----MLQLA----WETGLCWDIFKGLSR----LQILYLNNNYLNFLPPGIF- 535

  Fly   550 RNSRLMGKQNMSSPMELHLSKNNISNITIAMLPKELRFLDLRFNNLVTLDDKVLSYLKKNSIKTK 614
                    ..:.:...|.||.|.::.::...||..|..||:..|.|.:.|..:.|.|:...|   
  Rat   536 --------NGLVALRMLSLSANRLTMLSPGSLPANLEILDISRNQLFSPDPGLFSSLRALDI--- 589

  Fly   615 LSGNPWNCDCKSRSVLSILRDHEPLEYDVTLKRCNI----SPTDCPDVCVCCLDNLTWPSFIVDC 675
             :.|.:.|||:..:.:            |.|.:.|:    ||.|     |.|:    :|:.::. 
  Rat   590 -THNEFICDCELSTFI------------VWLNQTNVTLFGSPAD-----VYCM----YPNSLLG- 631

  Fly   676 RGEGLLQMPSLSSRVTYVDLRNNNLTALSQKNRSSIENRSLKLHLLDNPWSCSCNDIEKINFMKS 740
                                             ||:.|.|.|          .|::.|.:   :|
  Rat   632 ---------------------------------SSLYNISTK----------DCDEEEAV---RS 650

  Fly   741 VSSSIVDFTEIKCSNGEKLVSINQHIVCPSDLFYYLALAISLVATIIALNFLIWFRQPVLVWFYE 805
            ::.|:                   .|:|.      :.|.:.||.|:|...|              
  Rat   651 LNFSL-------------------FILCT------VTLTLFLVITLIVTKF-------------- 676

  Fly   806 HGVCLSL--SAKRELDKDK---------RFDAFLAFTHKD-----EALLEEFVDRLERGRPRFQL 854
            .|:|...  :.::.:.|.|         |:||:..|:.||     .|||:. :|.....:.|.:|
  Rat   677 RGICFLCFKTIQKLMFKGKFRNPEPSAYRYDAYFCFSSKDFEWAQNALLKH-LDAQYSSQNRLRL 740

  Fly   855 CFYLRDWLAGESIPDCIGQSIKDSRRIIVLMTENFMNSTWGRLEFRLALHATSRDRCKRLIVVLY 919
            ||..||::.||:....|..::..||:.:.|::.:|:...|....||.|......|..:.||||:.
  Rat   741 CFEERDFIPGENHISNIQAAVWGSRKTVCLVSRHFLKDGWCLEAFRYAQSRCLSDLKRVLIVVVV 805

  Fly   920 PNVKNFDSLDSE-LRTYMAFNTYL 942
            .::..:..:..| :|.::....||
  Rat   806 GSLPQYQLMRHETIRGFLQKQQYL 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 PRK15370 <315..>398 CDD:185268 18/86 (21%)
leucine-rich repeat 325..345 CDD:275378 4/19 (21%)
leucine-rich repeat 346..367 CDD:275378 7/23 (30%)
TIR 823..960 CDD:214587 36/126 (29%)
Tlr5NP_001139300.1 LRR <95..323 CDD:443914 39/206 (19%)
LRR_8 <96..143 CDD:404697
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..158 CDD:275380 3/8 (38%)
leucine-rich repeat 159..183 CDD:275380 3/23 (13%)
leucine-rich repeat 184..217 CDD:275380 8/42 (19%)
leucine-rich repeat 240..301 CDD:275380 14/69 (20%)
LRR 261..>573 CDD:443914 74/354 (21%)
leucine-rich repeat 302..325 CDD:275380 4/22 (18%)
leucine-rich repeat 326..349 CDD:275380 5/22 (23%)
leucine-rich repeat 350..373 CDD:275380 6/22 (27%)
leucine-rich repeat 374..397 CDD:275380 6/22 (27%)
leucine-rich repeat 398..432 CDD:275380 10/51 (20%)
leucine-rich repeat 433..461 CDD:275380 7/28 (25%)
leucine-rich repeat 462..487 CDD:275380 5/24 (21%)
leucine-rich repeat 488..516 CDD:275380 4/36 (11%)
leucine-rich repeat 517..540 CDD:275380 7/31 (23%)
leucine-rich repeat 541..559 CDD:275380 4/17 (24%)
leucine-rich repeat 563..586 CDD:275380 8/22 (36%)
PCC 567..>645 CDD:188093 26/146 (18%)
TIR 706..856 CDD:396246 35/125 (28%)
Blue background indicates that the domain is not in the aligned region.

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