DRSC/TRiP Functional Genomics Resources

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Protein Alignment MstProx and Cd180

DIOPT Version :9

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_032559.2 Gene:Cd180 / 17079 MGIID:1194924 Length:661 Species:Mus musculus


Alignment Length:804 Identity:159/804 - (19%)
Similarity:262/804 - (32%) Gaps:280/804 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 KVIERDVHYINGPKSLKIIIQSNLYLNEIIEYINKTTDNVNEIIINAYKTVENQQIALDNLIFNG 177
            |.||::|:        |.....||.||||...:..:|:.: |...|...|::|...         
Mouse    27 KCIEKEVN--------KTYNCENLGLNEIPGTLPNSTECL-EFSFNVLPTIQNTTF--------- 73

  Fly   178 KSHLRSLTFIGF---QIENLSTKPFAQFINLKRMVLTNCTVRNLTFLRTL----QKSLEHLELDI 235
             |.|.:|||:..   ||..:....|.....|..:||   |...|.|:...    .|:|:||    
Mouse    74 -SRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVL---TANPLIFMAETALSGPKALKHL---- 130

  Fly   236 DNEVDLKYF--TNFSSLKFMKVRNYIPNKNFTALICTHKNCNFIRGINGLECPKLCQCLYI---- 294
                   :|  |..||:.|:.:.|                            .|..:.||:    
Mouse   131 -------FFIQTGISSIDFIPLHN----------------------------QKTLESLYLGSNH 160

  Fly   295 IDDLELNIDCSNLGLLQIPPLPIPSYGGVKLNFSNNSLSQLPTMTLPGYKLVKRLDVSR-NRLTN 358
            |..::|             |...|:.....|:|.||::..|           .:.|:|. .:.||
Mouse   161 ISSIKL-------------PKGFPTEKLKVLDFQNNAIHYL-----------SKEDMSSLQQATN 201

  Fly   359 LSINHLPAKLDYLDVSFNEIINMGNDVIKYLRTVPIFKQTGNQWTIHCDDKPLLNFFRHLK---- 419
            ||:|     |:..|::..|:....:.|.:.|.    |..|.|          ||..|:.||    
Mouse   202 LSLN-----LNGNDIAGIELGAFDSAVFQSLN----FGGTQN----------LLVIFKGLKNSTI 247

  Fly   420 ------LIIRMKSAEMKPMFLHSLTELPKGFLKFLGKHFIWLGVRKQEYYLINEEQLLQSMHRKL 478
                  ....|...::.|.....|.|:....:. |.||: :..:....::..:.   ||.:....
Mouse   248 QSLWLGTFEDMDDEDISPAVFEGLCEMSVESIN-LQKHY-FFNISSNTFHCFSG---LQELDLTA 307

  Fly   479 NNLNTIMSIYKYMEWLHRKLIFVNREYDLFYIRQMAAPCPHKCECCYSRDSLILKIDCRNKFVYN 543
            .:|:.:.|....:..|.:.::..|:..:|             |:...|                |
Mouse   308 THLSELPSGLVGLSTLKKLVLSANKFENL-------------CQISAS----------------N 343

  Fly   544 FP-----DIVARNSRL-MGK---QNMSSPMELHLSKNNISNITIAMLPKELRFLDLRFNNLVTLD 599
            ||     .|.....|| :|.   :|:.:..||.||.::|......         :|:..||..|.
Mouse   344 FPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCC---------NLQLRNLSHLQ 399

  Fly   600 DKVLSYLKKNSIKTKLSGNPWNCDCKSRSVLSILRDHEPLEYDVTLKRCNISPTDCPDVCVCCLD 664
            ...|||.:..|:||:...     :|....:|           |:...|..:.....|...:..|.
Mouse   400 SLNLSYNEPLSLKTEAFK-----ECPQLELL-----------DLAFTRLKVKDAQSPFQNLHLLK 448

  Fly   665 NLTWPSFIVDCRGEGLLQ-MPSLS----------------------------------------- 687
            .|.....::|...|.|.. :|:|.                                         
Mouse   449 VLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 513

  Fly   688 ------SRVTYVDLRNNNLT-----ALSQ---------KNRSSIENRSL--------KLHLLDNP 724
                  ..:.:|||.:|.||     |||.         .||.||...||        .::|..||
Mouse   514 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNRISIILPSLLPILSQQRTINLRQNP 578

  Fly   725 WSCSCNDIEKINFMKSVSSSIVDFTEIKCSN-----GEKL--VSINQHIVCPSDLFYYLALAISL 782
            ..|:|::|..:.:.|.....:.|..:..|.|     |.:|  |:::..:......|..:.|.:..
Mouse   579 LDCTCSNIYFLEWYKENMQKLEDTEDTLCENPPLLRGVRLSDVTLSCSMAAVGIFFLIVFLLVFA 643

  Fly   783 VATIIALNFLIWFRQPVLVWFYEH 806
            :..|.|:.:.       |.|.|:|
Mouse   644 ILLIFAVKYF-------LRWKYQH 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 leucine-rich repeat 325..345 CDD:275378 5/19 (26%)
leucine-rich repeat 346..367 CDD:275378 7/21 (33%)
leucine-rich repeat 563..583 CDD:275378 5/19 (26%)
leucine-rich repeat 585..610 CDD:275378 7/24 (29%)
leucine-rich repeat 611..622 CDD:275378 2/10 (20%)
TIR 823..960 CDD:214587
Cd180NP_032559.2 leucine-rich repeat 38..57 CDD:275380 7/18 (39%)
LRR 1 54..75 5/31 (16%)
leucine-rich repeat 58..78 CDD:275380 6/30 (20%)
LRR 2 78..99 6/20 (30%)
leucine-rich repeat 79..102 CDD:275380 6/22 (27%)
LRR 3 102..123 6/23 (26%)
leucine-rich repeat 103..126 CDD:275380 6/25 (24%)
LRR 4 126..147 8/31 (26%)
leucine-rich repeat 127..150 CDD:275380 9/61 (15%)
LRR 5 150..171 5/33 (15%)
leucine-rich repeat 151..174 CDD:275380 6/35 (17%)
LRR 6 174..195 6/31 (19%)
leucine-rich repeat 175..201 CDD:275380 7/36 (19%)
LRR 7 201..221 7/24 (29%)
leucine-rich repeat 224..275 CDD:275380 13/64 (20%)
LRR 8 275..296 3/22 (14%)
leucine-rich repeat 276..299 CDD:275380 3/24 (13%)
LRR 9 299..321 4/24 (17%)
leucine-rich repeat 300..322 CDD:275380 4/21 (19%)
LRR_8 321..382 CDD:290566 17/89 (19%)
LRR 10 322..343 5/49 (10%)
leucine-rich repeat 323..346 CDD:275380 7/51 (14%)
LRR_RI 345..>541 CDD:238064 40/220 (18%)
LRR 11 346..366 4/19 (21%)
leucine-rich repeat 347..371 CDD:275380 5/23 (22%)
LRR_8 371..432 CDD:290566 18/85 (21%)
LRR 12 371..391 5/28 (18%)
leucine-rich repeat 372..397 CDD:275380 8/33 (24%)
LRR 13 397..418 7/25 (28%)
leucine-rich repeat 398..421 CDD:275380 8/27 (30%)
LRR_8 420..481 CDD:290566 11/71 (15%)
LRR 14 421..442 4/31 (13%)
leucine-rich repeat 422..446 CDD:275380 4/34 (12%)
LRR 15 446..466 5/19 (26%)
leucine-rich repeat 447..470 CDD:275380 5/22 (23%)
LRR 16 470..493 1/22 (5%)
leucine-rich repeat 471..497 CDD:275380 1/25 (4%)
LRR_8 497..555 CDD:290566 10/57 (18%)
LRR 17 497..518 0/20 (0%)
leucine-rich repeat 498..521 CDD:275380 0/22 (0%)
LRR 18 521..544 9/22 (41%)
leucine-rich repeat 522..545 CDD:275380 9/22 (41%)
LRR 19 546..566 6/19 (32%)
LRRCT 577..626 CDD:214507 12/48 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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