DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MstProx and Tlr3

DIOPT Version :9

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_001344245.1 Gene:Tlr3 / 142980 MGIID:2156367 Length:905 Species:Mus musculus


Alignment Length:954 Identity:211/954 - (22%)
Similarity:342/954 - (35%) Gaps:280/954 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LRQLGVETVTRF------ENQINSFKVIERDVHYINGPKSLKIIIQSNLYLNEIIEYINKT---- 148
            ||:|.....||:      :...||...:|.::..|     |.::...||..||:.:..::|    
Mouse    64 LRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQI-----LPLLKVLNLQHNELSQISDQTFVFC 123

  Fly   149 ---------TDNVNEIIINAYKTVENQQIALDNLIFNGKSHLRSLTFIGFQIENLSTKPFAQFIN 204
                     ::::::|..|.:|..:| .|.|| |..||.|..:..|  |.|:|||.     :.:.
Mouse   124 TNLTELDLMSNSIHKIKSNPFKNQKN-LIKLD-LSHNGLSSTKLGT--GVQLENLQ-----ELLL 179

  Fly   205 LKRMVLTNCTVRNLTFLRTLQKSLEHLELDID--NEVDLKYFTNFSSLKFMKVRNYIPNKNFTAL 267
            .|..:|. .....|.||.  ..||..|:|..:  .|.....|.....|..:.:.|...|.:.|..
Mouse   180 AKNKILA-LRSEELEFLG--NSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEK 241

  Fly   268 ICTHKNCNFIRGINGLECPKLCQCLYIIDDLELNIDCSNLGLLQIPPLPIPSYGGVKLNFSNNSL 332
            :|...:                           |....||.|                  :||.|
Mouse   242 LCWELS---------------------------NTSIQNLSL------------------ANNQL 261

  Fly   333 SQLPTMTLPGYKL--VKRLDVSRNRL---TNLSINHLPAKLDYLDVSFNEIINM------GNDVI 386
            ......|..|.|.  :.:||:|.|.|   .|.|.::||: |.||.:.:|.|..:      |...:
Mouse   262 LATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPS-LRYLSLEYNNIQRLSPRSFYGLSNL 325

  Fly   387 KYLRTVPIF-KQTGN------------QWT-----IHCDDKPL----LNFFRHLKLIIRMKSAEM 429
            :||.....| ||:.:            ||.     ::.||..:    .|.|..|   :.:|...:
Mouse   326 RYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGL---VSLKYLSL 387

  Fly   430 KPMF--LHSLT---------------ELPKGFL-KFLGKHFIWLG-VRKQEYYLINEEQLLQSMH 475
            ...|  |.:||               .|.|..: |.....|.||| :|..:..|...||.|....
Mouse   388 SKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQE 452

  Fly   476 -RKLNNLNTI-MSIYKYMEWLHRKLIFVNREYDLFYIRQMAAPCPHKCECCYSRDSLIL-KIDCR 537
             |.|.|:..| :|..||::........|.                       |...|:| ::..:
Mouse   453 WRGLRNIFEIYLSYNKYLQLSTSSFALVP-----------------------SLQRLMLRRVALK 494

  Fly   538 NKFVYNFPDIVARNSRLMGKQNMSSPMELHLSKNNISNITIAMLP--KELRFLDLRFNNLVTLDD 600
            |..:...|....||..:           |.||.|||:||...:|.  :.|..||.:.|||..|  
Mouse   495 NVDISPSPFRPLRNLTI-----------LDLSNNNIANINEDLLEGLENLEILDFQHNNLARL-- 546

  Fly   601 KVLSYLKKNSIKTKLSGNPWNCDCKSRSVLSILR------DHEPL---EYDVTLKRCNISPTDCP 656
                :.:.|      .|.|.|. .|..|.|.||.      |..|:   :....||..|:.     
Mouse   547 ----WKRAN------PGGPVNF-LKGLSHLHILNLESNGLDEIPVGVFKNLFELKSINLG----- 595

  Fly   657 DVCVCCLDNLT-WPSFIVDCRGEGLLQMPSLSSRVTYVDLRNNNLTALSQ-------KNRSSIEN 713
                  |:||. ...||.|       ...||.|    ::|:.|.:|::.:       :|.:|::.
Mouse   596 ------LNNLNKLEPFIFD-------DQTSLRS----LNLQKNLITSVEKDVFGPPFQNLNSLDM 643

  Fly   714 RSLKLHLLDNPWSCSCNDIE-KINFMKSVSSSIVDFTEIKCSNGEKLVSINQHIVCPSDLFYYLA 777
            |.       ||:.|:|..|. .:|::....::|.:              ::.|.:|.:...|| .
Mouse   644 RF-------NPFDCTCESISWFVNWINQTHTNISE--------------LSTHYLCNTPHHYY-G 686

  Fly   778 LAISLVAT-------------IIALNFLIWFRQPVLV-----W---FYEHGVCLSLSAKRELD-- 819
            ..:.|..|             ||:.:.|:.|...||:     |   ||.:.....:...:|:|  
Mouse   687 FPLKLFDTSSCKDSAPFELLFIISTSMLLVFILVVLLIHIEGWRISFYWNVSVHRILGFKEIDTQ 751

  Fly   820 -KDKRFDAFLAFTHKDEALLEEFVDRLERGRPRFQLCFYLRDWLAGESIPDCIGQSIKDSRRIIV 883
             :...:.|::...|||...:.|....:|......:.|...||:.||....:.|..|||.||:||.
Mouse   752 AEQFEYTAYIIHAHKDRDWVWEHFSPMEEQDQSLKFCLEERDFEAGVLGLEAIVNSIKRSRKIIF 816

  Fly   884 LMTENFMNSTWGRLEFRL--ALHATSRDRCKRLIVVLYPNVKNF 925
            ::|.:.:.....| .|::  |:..........:|::...|:.::
Mouse   817 VITHHLLKDPLCR-RFKVHHAVQQAIEQNLDSIILIFLQNIPDY 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 leucine-rich repeat 325..345 CDD:275378 5/19 (26%)
leucine-rich repeat 346..367 CDD:275378 9/23 (39%)
leucine-rich repeat 563..583 CDD:275378 9/21 (43%)
leucine-rich repeat 585..610 CDD:275378 7/24 (29%)
leucine-rich repeat 611..622 CDD:275378 2/10 (20%)
TIR 823..960 CDD:214587 25/105 (24%)
Tlr3NP_001344245.1 leucine-rich repeat 37..53 CDD:275380
LRR 1 53..74 3/9 (33%)
leucine-rich repeat 54..77 CDD:275380 5/12 (42%)
PLN00113 70..>543 CDD:215061 127/572 (22%)
LRR 2 77..98 3/20 (15%)
leucine-rich repeat 78..101 CDD:275380 5/27 (19%)
LRR 3 101..122 5/20 (25%)
leucine-rich repeat 102..125 CDD:275380 5/22 (23%)
LRR 4 125..146 2/20 (10%)
leucine-rich repeat 126..149 CDD:275380 3/22 (14%)
LRR 5 149..170 10/24 (42%)
leucine-rich repeat 150..199 CDD:275380 18/59 (31%)
LRR 6 173..196 6/28 (21%)
LRR 7 199..220 6/20 (30%)
leucine-rich repeat 200..250 CDD:275380 11/76 (14%)
LRR 8 250..271 7/38 (18%)
leucine-rich repeat 251..276 CDD:275380 9/42 (21%)
LRR 9 276..297 7/20 (35%)
leucine-rich repeat 277..300 CDD:275380 8/22 (36%)
LRR 10 300..321 5/21 (24%)
leucine-rich repeat 301..324 CDD:275380 6/22 (27%)
LRR 11 324..345 5/20 (25%)
leucine-rich repeat 325..381 CDD:275380 12/58 (21%)
LRR 12 357..378 4/20 (20%)
LRR 13 381..401 5/19 (26%)
leucine-rich repeat 382..433 CDD:275380 11/50 (22%)
LRR 14 409..430 4/20 (20%)
LRR 15 433..454 5/20 (25%)
leucine-rich repeat 434..458 CDD:275380 7/23 (30%)
LRR 16 458..479 5/20 (25%)
leucine-rich repeat 459..482 CDD:275380 5/45 (11%)
LRR 17 482..502 4/19 (21%)
leucine-rich repeat 483..508 CDD:275380 4/24 (17%)
PPP1R42 503..>649 CDD:411060 49/198 (25%)
LRR 18 508..529 10/31 (32%)
leucine-rich repeat 509..532 CDD:275380 9/33 (27%)
LRR 19 532..553 8/32 (25%)
leucine-rich repeat 533..564 CDD:275380 12/43 (28%)
LRR 20 564..585 5/20 (25%)
leucine-rich repeat 565..586 CDD:275380 5/20 (25%)
LRR 21 588..609 9/38 (24%)
leucine-rich repeat 589..610 CDD:275378 9/38 (24%)
LRR 22 612..633 6/24 (25%)
leucine-rich repeat 613..637 CDD:275380 5/27 (19%)
LRRCT 646..698 CDD:214507 13/66 (20%)
Tlr3_TMD 699..731 CDD:407816 7/31 (23%)
TIR 756..901 CDD:214587 25/105 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24365
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.