DRSC/TRiP Functional Genomics Resources

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Protein Alignment MstProx and Tlr3

DIOPT Version :10

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_569054.2 Gene:Tlr3 / 142980 MGIID:2156367 Length:905 Species:Mus musculus


Alignment Length:954 Identity:211/954 - (22%)
Similarity:342/954 - (35%) Gaps:280/954 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LRQLGVETVTRF------ENQINSFKVIERDVHYINGPKSLKIIIQSNLYLNEIIEYINKT---- 148
            ||:|.....||:      :...||...:|.::..|     |.::...||..||:.:..::|    
Mouse    64 LRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQI-----LPLLKVLNLQHNELSQISDQTFVFC 123

  Fly   149 ---------TDNVNEIIINAYKTVENQQIALDNLIFNGKSHLRSLTFIGFQIENLSTKPFAQFIN 204
                     ::::::|..|.:|..:| .|.|| |..||.|..:..|  |.|:|||.     :.:.
Mouse   124 TNLTELDLMSNSIHKIKSNPFKNQKN-LIKLD-LSHNGLSSTKLGT--GVQLENLQ-----ELLL 179

  Fly   205 LKRMVLTNCTVRNLTFLRTLQKSLEHLELDID--NEVDLKYFTNFSSLKFMKVRNYIPNKNFTAL 267
            .|..:|. .....|.||.  ..||..|:|..:  .|.....|.....|..:.:.|...|.:.|..
Mouse   180 AKNKILA-LRSEELEFLG--NSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEK 241

  Fly   268 ICTHKNCNFIRGINGLECPKLCQCLYIIDDLELNIDCSNLGLLQIPPLPIPSYGGVKLNFSNNSL 332
            :|...:                           |....||.|                  :||.|
Mouse   242 LCWELS---------------------------NTSIQNLSL------------------ANNQL 261

  Fly   333 SQLPTMTLPGYKL--VKRLDVSRNRL---TNLSINHLPAKLDYLDVSFNEIINM------GNDVI 386
            ......|..|.|.  :.:||:|.|.|   .|.|.::||: |.||.:.:|.|..:      |...:
Mouse   262 LATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPS-LRYLSLEYNNIQRLSPRSFYGLSNL 325

  Fly   387 KYLRTVPIF-KQTGN------------QWT-----IHCDDKPL----LNFFRHLKLIIRMKSAEM 429
            :||.....| ||:.:            ||.     ::.||..:    .|.|..|   :.:|...:
Mouse   326 RYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGL---VSLKYLSL 387

  Fly   430 KPMF--LHSLT---------------ELPKGFL-KFLGKHFIWLG-VRKQEYYLINEEQLLQSMH 475
            ...|  |.:||               .|.|..: |.....|.||| :|..:..|...||.|....
Mouse   388 SKTFTSLQTLTNETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQE 452

  Fly   476 -RKLNNLNTI-MSIYKYMEWLHRKLIFVNREYDLFYIRQMAAPCPHKCECCYSRDSLIL-KIDCR 537
             |.|.|:..| :|..||::........|.                       |...|:| ::..:
Mouse   453 WRGLRNIFEIYLSYNKYLQLSTSSFALVP-----------------------SLQRLMLRRVALK 494

  Fly   538 NKFVYNFPDIVARNSRLMGKQNMSSPMELHLSKNNISNITIAMLP--KELRFLDLRFNNLVTLDD 600
            |..:...|....||..:           |.||.|||:||...:|.  :.|..||.:.|||..|  
Mouse   495 NVDISPSPFRPLRNLTI-----------LDLSNNNIANINEDLLEGLENLEILDFQHNNLARL-- 546

  Fly   601 KVLSYLKKNSIKTKLSGNPWNCDCKSRSVLSILR------DHEPL---EYDVTLKRCNISPTDCP 656
                :.:.|      .|.|.|. .|..|.|.||.      |..|:   :....||..|:.     
Mouse   547 ----WKRAN------PGGPVNF-LKGLSHLHILNLESNGLDEIPVGVFKNLFELKSINLG----- 595

  Fly   657 DVCVCCLDNLT-WPSFIVDCRGEGLLQMPSLSSRVTYVDLRNNNLTALSQ-------KNRSSIEN 713
                  |:||. ...||.|       ...||.|    ::|:.|.:|::.:       :|.:|::.
Mouse   596 ------LNNLNKLEPFIFD-------DQTSLRS----LNLQKNLITSVEKDVFGPPFQNLNSLDM 643

  Fly   714 RSLKLHLLDNPWSCSCNDIE-KINFMKSVSSSIVDFTEIKCSNGEKLVSINQHIVCPSDLFYYLA 777
            |.       ||:.|:|..|. .:|::....::|.:              ::.|.:|.:...|| .
Mouse   644 RF-------NPFDCTCESISWFVNWINQTHTNISE--------------LSTHYLCNTPHHYY-G 686

  Fly   778 LAISLVAT-------------IIALNFLIWFRQPVLV-----W---FYEHGVCLSLSAKRELD-- 819
            ..:.|..|             ||:.:.|:.|...||:     |   ||.:.....:...:|:|  
Mouse   687 FPLKLFDTSSCKDSAPFELLFIISTSMLLVFILVVLLIHIEGWRISFYWNVSVHRILGFKEIDTQ 751

  Fly   820 -KDKRFDAFLAFTHKDEALLEEFVDRLERGRPRFQLCFYLRDWLAGESIPDCIGQSIKDSRRIIV 883
             :...:.|::...|||...:.|....:|......:.|...||:.||....:.|..|||.||:||.
Mouse   752 AEQFEYTAYIIHAHKDRDWVWEHFSPMEEQDQSLKFCLEERDFEAGVLGLEAIVNSIKRSRKIIF 816

  Fly   884 LMTENFMNSTWGRLEFRL--ALHATSRDRCKRLIVVLYPNVKNF 925
            ::|.:.:.....| .|::  |:..........:|::...|:.::
Mouse   817 VITHHLLKDPLCR-RFKVHHAVQQAIEQNLDSIILIFLQNIPDY 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 PRK15370 <315..>398 CDD:185268 25/94 (27%)
leucine-rich repeat 325..345 CDD:275378 5/19 (26%)
leucine-rich repeat 346..367 CDD:275378 9/23 (39%)
TIR 823..960 CDD:214587 25/105 (24%)
Tlr3NP_569054.2 LRR 3 101..122 5/20 (25%)
leucine-rich repeat 102..125 CDD:275380 5/22 (23%)
LRR 4 125..146 2/20 (10%)
leucine-rich repeat 126..149 CDD:275380 3/22 (14%)
LRR 5 149..170 10/24 (42%)
leucine-rich repeat 150..199 CDD:275380 18/59 (31%)
LRR 6 173..196 6/28 (21%)
LRR 7 199..220 6/20 (30%)
leucine-rich repeat 200..250 CDD:275380 11/76 (14%)
LRR 8 250..271 7/38 (18%)
leucine-rich repeat 251..276 CDD:275380 9/42 (21%)
LRR 9 276..297 7/20 (35%)
leucine-rich repeat 277..300 CDD:275380 8/22 (36%)
LRR 10 300..321 5/21 (24%)
leucine-rich repeat 301..324 CDD:275380 6/22 (27%)
LRR 11 324..345 5/20 (25%)
leucine-rich repeat 325..381 CDD:275380 12/58 (21%)
LRR 12 357..378 4/20 (20%)
LRR 13 381..401 5/19 (26%)
leucine-rich repeat 382..433 CDD:275380 11/50 (22%)
LRR 14 409..430 4/20 (20%)
LRR 15 433..454 5/20 (25%)
leucine-rich repeat 434..458 CDD:275380 7/23 (30%)
LRR 16 458..479 5/20 (25%)
leucine-rich repeat 459..482 CDD:275380 5/45 (11%)
LRR 17 482..502 4/19 (21%)
leucine-rich repeat 483..508 CDD:275380 4/24 (17%)
PPP1R42 503..>649 CDD:455733 49/198 (25%)
LRR 18 508..529 10/31 (32%)
leucine-rich repeat 509..532 CDD:275380 9/33 (27%)
LRR 19 532..553 8/32 (25%)
leucine-rich repeat 533..564 CDD:275380 12/43 (28%)
LRR 20 564..585 5/20 (25%)
leucine-rich repeat 565..586 CDD:275380 5/20 (25%)
LRR 21 588..609 9/38 (24%)
leucine-rich repeat 589..610 CDD:275378 9/38 (24%)
LRR 22 612..633 6/24 (25%)
leucine-rich repeat 613..637 CDD:275380 5/27 (19%)
LRRCT 646..698 CDD:214507 13/66 (20%)
Tlr3_TMD 699..731 CDD:465595 7/31 (23%)
TIR 756..901 CDD:214587 25/105 (24%)
leucine-rich repeat 37..53 CDD:275380
LRR 1 53..74 3/9 (33%)
leucine-rich repeat 54..77 CDD:275380 5/12 (42%)
PLN00113 70..>543 CDD:215061 127/572 (22%)
LRR 2 77..98 3/20 (15%)
leucine-rich repeat 78..101 CDD:275380 5/27 (19%)
Blue background indicates that the domain is not in the aligned region.

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