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Protein Alignment MstProx and cd180

DIOPT Version :9

Sequence 1:	NP_649719.2	Gene:	MstProx / 40890	FlyBaseID:	FBgn0015770	Length:	965	Species:	Drosophila melanogaster
Sequence 2:	NP_001297419.1	Gene:	cd180 / 101885327	ZFINID:	ZDB-GENE-070705-323	Length:	665	Species:	Danio rerio

Alignment Length:	754	Identity:	148/754 - (19%)
Similarity:	268/754 - (35%)	Gaps:	231/754 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly   110 NSFKVIERDVHYI----NGP----KSLKIIIQSNLYLNEIIEYINKTTDNVNEIIINAYKTVENQ 166
            ||.::::...:|:    |..    |||:.:..:...:..|.|.:.....::..:::..     |.
Zfish    55 NSVQILQFSFNYLPALYNSTFQRLKSLRSLDVTRCSITFIYEDVFTYQPHLEVLLLTG-----NP 114

  Fly   167 QIALDNLIFNGKSHLRSLTFIGFQIENLSTKPFAQFINLKRMVLTNCTVRNLTFLRTLQ-KSLEH 230
            .:.:.:..|:|...|:.|:.:..:|:.||..|......|:.:.|....:|:|..|...: ::|:.
Zfish   115 LVFIASTAFSGPLALKYLSLVQSKIKQLSDIPSENLAYLEVLDLRGSNIRSLNGLSNFRWQNLKS 179

  Fly   231 LELDID-----NEVDLKYFTNFSSLKFMKVRN---YIPNKNFTALI--------CTHKN--CNFI 277
            |:||::     :..||:.|:|.:.:......|   ||....|.:|.        |.:|.  .:.:
Zfish   180 LQLDLNFIDRISFNDLQPFSNLAGVSISFKGNDFIYIEPGAFHSLNLSSLDFSGCLNKMNISSLL 244

  Fly   278 RGINGLECPKLCQCLYIIDDLELNIDCSNLGLLQIPPLPIPSYGGV---KLNFSNNSLSQLPTMT 339
            :|:.|::..:|...||..|        ||   :.|....:.|:..:   .|:|.......|...|
Zfish   245 KGLEGIKTNRLNLGLYETD--------SN---VYIASAALQSFCNIFVSDLDFQLQHFLDLNNST 298

  Fly   340 LPGYKLVKRLDVSRNRLTNLSINHLPAKLDYLDVSFNEIINMGNDVIKYLRTVPIFKQTGNQWTI 404
            ....:.:|:||::|..|..|.:|                 ..|...:.:|    |..:  ||:..
Zfish   299 FHCLEGLKKLDLTRAHLNALPLN-----------------TTGLSTLSHL----ILDE--NQFKD 340

  Fly   405 HCDDK----PLLNFFRHLKLIIRMKSAEMKPMFLHSLTELPKGFLKFLGKHFIWLGVRKQEYYLI 465
            .|...    |:|.   ||.:...:|........|.||     |.|:.|.     |.|.     |:
Zfish   341 VCQSNTRNFPMLT---HLSISGNLKKLTFSNRCLDSL-----GLLEELD-----LSVS-----LV 387

  Fly   466 N------EEQLLQSMHRKLNNLNTIMSIYKYMEWLHR------KLIFVNREYDLFYIRQMAAPCP 518
            |      ..||......||.||    |....|.|..:      ||..::..:.::.:...::|.
Zfish   388 NPREPCCNNQLFGLGELKLLNL----SYGSPMFWSSKPFNVTPKLEHLDFSHSVYTLLNDSSPF- 447

  Fly   519 HKCECCYSRDSLILKIDCRNKFVYNFPDIVARNSRLMGKQNMSSPMELHLSKNN--ISNITIAML 581
                                                   .|:.|...|:||.:|  ::|:.:.:.
Zfish   448 ---------------------------------------SNLQSLRTLNLSWSNTDLTNVHLFVG 473

  Fly   582 PKELRFLDLRFNNLVTLDDKVLSYLKKNSIKTKLSGNPWNCDCKSRSVLSILRDHEPLEYDVTLK 646
            .|.|:.|:||.|   .:..:||:       :|:|    :.|              .||...:.|.
Zfish   474 LKALQHLNLRGN---AIQGEVLT-------QTEL----FKC--------------VPLLETLVLS 510

  Fly   647 RCNISPTDCPDVCVCCLDNLTWPSFIVDCRGEGLLQMPSLSSRVTYVDLRNNNLTALSQKNRSSI 711
            .|.|:..|         :||.          :||       ..:.::||..|....||.....|:
Zfish   511 ACKITSFD---------ENLF----------KGL-------RHLNHIDLSENKFVKLSTSGFYSL 549

  Fly   712 ENRSLKLH------------------------LLDNPWSCSCNDIEKINFMKSVSSSIVDFTEIK 752
            :  .|||:                        |..||..|:|::.|.|:::|.....:....|..
Zfish   550 D--FLKLNFARNDITTVDVASVADLGEEGSVDLSYNPLVCNCSNFEFIHWVKKNKVKVKHLMETF 612

  Fly   753 CS-NGEKLVSINQHIVCPSDLFYYLA-LAISLVATIIAL 789
            |: .|.:::........|..:..:.| ||..|:|:.|.|
Zfish   613 CNGTGTRIIDAKLQCDLPVGVLVFCAVLAAVLLASAIFL 651

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.