DRSC/TRiP Functional Genomics Resources

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Protein Alignment MstProx and tlrs5

DIOPT Version :10

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:XP_002937550.2 Gene:tlrs5 / 100489423 XenbaseID:XB-GENE-22201327 Length:653 Species:Xenopus tropicalis


Alignment Length:575 Identity:119/575 - (20%)
Similarity:201/575 - (34%) Gaps:141/575 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 FNGKSHLRSLTFIGFQIENLSTKPF----------AQFINLKRMVLTNCTVRNLTFLRTLQKSLE 229
            |.|..:|.:|...|.:|.||..:.|          .....|...||.:...::||.|:.|..|..
 Frog   102 FRGFPNLITLDLGGNRIINLHPEAFEGLSWLEVLLLDHNGLDESVLESGMFKDLTSLKKLDLSFN 166

  Fly   230 HLELDIDNEVDLKYFT-NFSSLKFMKVRNYIPNKNFTALICTHKNCNFIRG---------INGLE 284
            ::.....:...||..: :|..|||.||          :::|.....| ::|         .|.|:
 Frog   167 NIRRVRPDPTFLKLSSISFLLLKFNKV----------SMLCGEDLQN-LQGRRLQLLDMSSNPLQ 220

  Fly   285 CPKLCQCLYIIDDLEL-NIDCSNLGL--------------LQIPPLPIPSYGGVKLNFSNNSLSQ 334
            ......|....:::.| .:|.|::|.              .|:..:.:....|:...|..::|..
 Frog   221 LSSTPHCTNPFNNITLGTLDVSSMGWNAEMVENFVRTISGTQVDYIKMRHTAGLGSGFGFHNLKD 285

  Fly   335 LPTMTLPGYKL--VKRLDVSRNRLTNLSINHLPA--KLDYLDVSFNEIINMGNDVIKYLRTVPIF 395
            ....|..|...  |:.||:|...:::|......|  ||..||:|.|:|..|.:.....|..:...
 Frog   286 PNKDTFSGLNSSNVQILDLSNGFISHLVPQLFSAFPKLLSLDLSSNQINRMSSGAFSGLGELVSL 350

  Fly   396 KQTGNQWTIHCDDKPLLNFFRHLKLIIRMKSAEMKPMFLHSLTELPKGFLKFLGKHFIWLGVRKQ 460
            ..:||                   |:..:..:..:.:...||..     |.....|     :...
 Frog   351 NLSGN-------------------LLGELMGSSFQGLGATSLKT-----LDLSSNH-----IGAV 386

  Fly   461 EYYLINEEQLLQSMHRKLNNLNTIMSIYKYMEWLHRKLIFVNREYDLFYIRQMAAPCPHKCECCY 525
            :|..::....|.|::.:.|.||.|..  ..::.:...|:..||..|::.|...   |||......
 Frog   387 QYGALDSFTALTSLNLRDNALNKIPP--TKLQGVTFVLLKQNRISDIYNIISF---CPHATILDL 446

  Fly   526 SRDSL----------------ILKIDCRNKFVYNFPDI--VARNSRLM---------------GK 557
            |.:.|                .|.:...:.:..:.|..  :.|.|.|:               |:
 Frog   447 SSNRLTDFRSLWQILELQSLKYLSLASNSLYRCSLPHTSNITRTSGLVYLDLSDNALGPVLKSGE 511

  Fly   558 -----QNMSSPMELHLSKNNISNITIAMLP--KELRFLDLRFNNLVTLDDKVLSYLKKNSIKTKL 615
                 .::.|...|:|::|.:|||...|..  ..|:.|||..|....:...:.:.|  .::||..
 Frog   512 CGDIFMHLGSLKSLNLARNQLSNIPDTMFRSLSSLQTLDLSGNGFKEIQSNLFTGL--TALKTLN 574

  Fly   616 SGNPWNCDCKSRSVLSILRDHEPLEY-DVTLKRCNISPTDCPDVCVCCL-DNLTW 668
            .|.. |....|.|||..|...|.::. :|||            ||.|.| |...|
 Frog   575 LGKS-NLVTLSSSVLDPLGSLESIDLSEVTL------------VCDCSLWDFWKW 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 PRK15370 <315..>398 CDD:185268 20/86 (23%)
leucine-rich repeat 325..345 CDD:275378 4/19 (21%)
leucine-rich repeat 346..367 CDD:275378 6/22 (27%)
TIR 823..960 CDD:214587
tlrs5XP_002937550.2 RNA1 <100..269 CDD:444072 36/177 (20%)
LRR_8 106..168 CDD:404697 15/61 (25%)
leucine-rich repeat 108..131 CDD:275380 7/22 (32%)
leucine-rich repeat 132..157 CDD:275380 4/24 (17%)
leucine-rich repeat 158..182 CDD:275380 5/23 (22%)
leucine-rich repeat 183..208 CDD:275380 9/35 (26%)
leucine-rich repeat 209..232 CDD:275380 3/22 (14%)
LRR 291..632 CDD:443914 79/375 (21%)
leucine-rich repeat 299..322 CDD:275380 6/22 (27%)
leucine-rich repeat 323..346 CDD:275380 8/22 (36%)
leucine-rich repeat 347..372 CDD:275380 3/43 (7%)
leucine-rich repeat 373..396 CDD:275380 4/32 (13%)
leucine-rich repeat 397..440 CDD:275380 12/47 (26%)
leucine-rich repeat 418..431 CDD:275378 3/12 (25%)
leucine-rich repeat 441..492 CDD:275380 5/50 (10%)
leucine-rich repeat 493..521 CDD:275380 2/27 (7%)
leucine-rich repeat 522..545 CDD:275380 7/22 (32%)
leucine-rich repeat 546..569 CDD:275380 6/24 (25%)
leucine-rich repeat 570..591 CDD:275380 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.

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