DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MstProx and tlr20.4

DIOPT Version :9

Sequence 1:NP_649719.2 Gene:MstProx / 40890 FlyBaseID:FBgn0015770 Length:965 Species:Drosophila melanogaster
Sequence 2:XP_009303038.2 Gene:tlr20.4 / 100005571 ZFINID:ZDB-GENE-071002-1 Length:951 Species:Danio rerio


Alignment Length:985 Identity:207/985 - (21%)
Similarity:358/985 - (36%) Gaps:299/985 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NIFIISPISKENRLKLNELIVSDTSYPIRAVDYLRQLGVETVTRFENQINSFKVIERD--VHYIN 123
            |:|...|..:|  |.|..:.:::.|              |.:.|..| :.|.|....|  :|.:.
Zfish   164 NVFDKIPHLEE--LHLGNVCLNNIS--------------EVLCRLAN-VKSLKQFNLDGVLHKLQ 211

  Fly   124 GPKSLKIIIQSNLYLNEIIEYINKTTDNVNEIIINAYKTVENQQIALDNLIFNGK--------SH 180
             ..:..:...||:.....||.:|.|...|..:...|.||.             ||        ||
Zfish   212 -HSNCSVFNTSNISTEFNIEKVNLTLTKVEHVDEGALKTF-------------GKLFFFQFFVSH 262

  Fly   181 ---LRSLTFIG--------FQIENLSTKPF---AQFINLKRMVLTNCTVRNLTFLRT-LQKSLEH 230
               ||.|:.||        |:::.|:....   |:..:::||.::...: ||:...| :....|:
Zfish   263 TDFLRDLSLIGVHKIRTLDFKVDVLNVDDLCVAAKLYSVERMFVSYEMI-NLSVTPTNMSDGCEY 326

  Fly   231 -LELDIDNEVDLK---------YFTNFSSLKFMKVRNYIPNKNFTALICTHKNCNFIRGINGLEC 285
             :.:.:.|::.:|         .|..||:|..:.::.:|...|....:|    .:|.:.:..|..
Zfish   327 IMSIALSNDISVKIVDLLDVYSLFQIFSNLTTVTIQYHILRSNDFLSLC----ASFPQAVKQLSV 387

  Fly   286 PKL------------CQCLYIIDDLELNI-------DCSNLGLLQIPPLPIPSYGGVKLNFSNNS 331
            ..|            ..|...:..|:|.:       |.:.:||.::.          :||..:|.
Zfish   388 MILKNNRIDKIVSHQFMCFVNLKTLKLVMSKISVFEDFAFIGLNKLK----------ELNLHSNK 442

  Fly   332 LSQLPTMTLPGYKLVKRLDVSRNRLTNLSINHLPAKLDYLD-VSFNEIINMGNDVIKYLRTVPIF 395
            :|.:...|..|...::.||:..|.:.            |:: .||....|:.:.::         
Zfish   443 ISSIHRHTFSGLHELRVLDLQENPII------------YIEPKSFGHFTNLSSLLL--------- 486

  Fly   396 KQTGNQWTIHCDDKPLLNFFRHLKLIIRMKSAEMKPMFLHSLTELPKGFLKFLGKHFIWLGVRKQ 460
               |:           |||..::.||           .|| |:::..|....|...||..|:|..
Zfish   487 ---GD-----------LNFPPNMSLI-----------KLH-LSDIFGGIPSNLSNVFISSGLRPM 525

  Fly   461 EYYLINEEQLLQSMHRKLNN-LNTIMSIYKYMEWLHRKLIFVNREYDLFYIRQMAAPCPHKCECC 524
                    .|:...:..||| ||           ||.|..:|..|               .|...
Zfish   526 --------HLVIGSNTTLNNGLN-----------LHIKGQYVIVE---------------DCNSL 556

  Fly   525 YSRDSLILKID-----CRNKFVYNF-PDIVARNSRLMGKQNMSS----PMELHLSKNNISNITIA 579
            .....:.|:|.     |.|:|:..: |.:|:...:.|...|:..    ...:||....:.||.:.
Zfish   557 LLTSVVTLQIQAAYMICENEFIGKYVPSVVSLEFQSMFADNIGDLSVINQLVHLKTLKLENIDLT 621

  Fly   580 MLPKELRFLDLRFNNLVTLDDKVLS-----YLKKNSIKTKLSGNPWNCDCKSRSVLSILRDHEPL 639
            ..|.    ..:.|:||..|:..:|.     :|.|:..|          |.|:.:.|.::    |.
Zfish   622 NQPN----TGIMFHNLTKLEKMILMNCKIFFLDKSVTK----------DLKALTSLVLI----PK 668

  Fly   640 EYDVTLKRCNISPT-------DCPDVCVCCLDNLTWPSFIVDCRGEGLLQMPSLSSRVTYVDLRN 697
            |....::.....||       .|.|: .|..|| ||                    .|:::  |:
Zfish   669 EAVNIIQNFMEQPTHLKYLHFQCLDL-YCSCDN-TW--------------------LVSWI--RD 709

  Fly   698 NNLTALSQKNRSSIENRSLKLHLLDNPWSCSCNDIEKINFM---KSVSSSIVDFTEIKCSNGEKL 759
            |....:...|.|..:.|.|           :.::::.:||:   |...|..:||....||:    
Zfish   710 NGKVEVVMSNPSMEDLRCL-----------TDDEVDHLNFISYAKENCSIDLDFVFFSCSS---- 759

  Fly   760 VSINQHIVCPSDLFYYLALAISLVATIIALNFLI---WFRQPVLVWFYEHGVCLSLSAKRELDKD 821
                 ..:|   :|..:.|....|.......:.|   |||:           .|.:..|::.   
Zfish   760 -----VFLC---IFIVVVLMYKFVGQYFKPFYHIASGWFRE-----------ALRMKEKQQY--- 802

  Fly   822 KRFDAFLAFTHKDEA-LLEEFVDRLE-RGRPRFQLCFYLRDWLAGESIPDCIGQSIKDSRRIIVL 884
             |:|||::::.|||. ::||.:..|| ||.|..:||.:.||:..|..|.:.|..||..|||.:.|
Zfish   803 -RYDAFVSYSGKDEHWVIEELLPNLEQRGPPFLRLCLHSRDFQLGHDIVENITDSIYASRRTLCL 866

  Fly   885 MTENFMNSTWGRLEFRLALHATSRDRCKRLIVVLYPNV-KNFDSLDSELRTYMAFNTYLE----- 943
            ::.|::||.|..:|.:||.:....:....||:|....: ....|....|...:...|||:     
Zfish   867 VSRNYLNSNWCSVEMQLATYRLQVEHRDILILVFLETIPSRLLSSHHRLARLVKTRTYLDWPQEP 931

  Fly   944 RSHPNFWNKL 953
            ..|..||::|
Zfish   932 EMHEAFWDRL 941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MstProxNP_649719.2 leucine-rich repeat 325..345 CDD:275378 6/19 (32%)
leucine-rich repeat 346..367 CDD:275378 3/20 (15%)
leucine-rich repeat 563..583 CDD:275378 4/19 (21%)
leucine-rich repeat 585..610 CDD:275378 7/29 (24%)
leucine-rich repeat 611..622 CDD:275378 1/10 (10%)
TIR 823..960 CDD:214587 46/139 (33%)
tlr20.4XP_009303038.2 leucine-rich repeat 99..121 CDD:275380
leucine-rich repeat 148..171 CDD:275380 2/6 (33%)
leucine-rich repeat 172..197 CDD:275380 7/41 (17%)
leucine-rich repeat 229..265 CDD:275380 12/48 (25%)
leucine-rich repeat 385..408 CDD:275378 3/22 (14%)
LRR_8 408..467 CDD:316378 14/68 (21%)
leucine-rich repeat 409..432 CDD:275378 5/22 (23%)
PLN00113 <427..>516 CDD:331614 26/145 (18%)
leucine-rich repeat 433..456 CDD:275378 6/32 (19%)
leucine-rich repeat 457..480 CDD:275378 6/34 (18%)
leucine-rich repeat 541..584 CDD:275380 11/57 (19%)
leucine-rich repeat 585..609 CDD:275380 3/23 (13%)
leucine-rich repeat 610..635 CDD:275380 7/28 (25%)
leucine-rich repeat 636..659 CDD:275380 6/32 (19%)
TIR 803..941 CDD:214587 45/137 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.