DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMAD4 and Smad4

DIOPT Version :10

Sequence 1:NP_005350.1 Gene:SMAD4 / 4089 HGNCID:6770 Length:552 Species:Homo sapiens
Sequence 2:NP_062148.1 Gene:Smad4 / 50554 RGDID:3033 Length:552 Species:Rattus norvegicus


Alignment Length:552 Identity:545/552 - (98%)
Similarity:546/552 - (98%) Gaps:0/552 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNG 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNG 65

Human    66 AHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNP 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 AHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNP 130

Human   131 YHYERVVSPGIDLSGLTLQSNAPSSMMVKDEYVHDFEGQPSLSTEGHSIQTIQHPPSNRASTETY 195
            |||||||||||||||||||||||.||:|||||||||||||||.||||||||||||||||||||||
  Rat   131 YHYERVVSPGIDLSGLTLQSNAPPSMLVKDEYVHDFEGQPSLPTEGHSIQTIQHPPSNRASTETY 195

Human   196 STPALLAPSESNATSTANFPNIPVASTSQPASILGGSHSEGLLQIASGPQPGQQQNGFTGQPATY 260
            |.||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||.|||||
  Rat   196 SAPALLAPSESNATSTTNFPNIPVASTSQPASILAGSHSEGLLQIASGPQPGQQQNGFTAQPATY 260

Human   261 HHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGHYWPVHNELAFQPPISNHPAPEYWCS 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 HHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGHYWPVHNELAFQPPISNHPAPEYWCS 325

Human   326 IAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLE 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 IAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLE 390

Human   391 CKGEGDVWVRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQ 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   391 CKGEGDVWVRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQ 455

Human   456 AAAAAQAAAVAGNIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKE 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   456 AAAAAQAAAVAGNIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKE 520

Human   521 TPCWIEIHLHRALQLLDEVLHTMPIADPQPLD 552
            ||||||||||||||||||||||||||||||||
  Rat   521 TPCWIEIHLHRALQLLDEVLHTMPIADPQPLD 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMAD4NP_005350.1 Mediates interaction with ZBTB7A. /evidence=ECO:0000269|PubMed:25514493 1..322 313/320 (98%)
MH1_SMAD_4 14..138 CDD:199816 123/123 (100%)
Required for interaction with TSC22D1. /evidence=ECO:0000269|PubMed:15881652 44..69 24/24 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..194 24/25 (96%)
Pneumo_att_G <176..>281 CDD:114270 100/104 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..256 19/19 (100%)
SAD 275..320 44/44 (100%)
MH2_SMAD_4 320..541 CDD:199823 220/220 (100%)
Smad4NP_062148.1 Mediates interaction with ZBTB7A. /evidence=ECO:0000250|UniProtKB:Q13485 1..322 313/320 (98%)
MH1_SMAD_4 14..138 CDD:199816 123/123 (100%)
Required for interaction with TSC22D1. /evidence=ECO:0000250|UniProtKB:Q13485 44..69 24/24 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..193 24/25 (96%)
SAD 275..320 44/44 (100%)
MH2_SMAD_4 320..541 CDD:199823 220/220 (100%)

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