Sequence 1: | NP_731156.1 | Gene: | nxf4 / 40884 | FlyBaseID: | FBgn0051501 | Length: | 301 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009306018.1 | Gene: | nxf1a / 751719 | ZFINID: | ZDB-GENE-060825-299 | Length: | 642 | Species: | Danio rerio |
Alignment Length: | 243 | Identity: | 66/243 - (27%) |
---|---|---|---|
Similarity: | 103/243 - (42%) | Gaps: | 40/243 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 GDFKFESKNGARLPRSIYGWYRVLI---YSTDRRLTFNRVLRRIRCILTPLKINPRYKHTGGEQD 85
Fly 86 TAEDSWALFTFFVDSYDVASALFR--RGWVDNQ----IWLKVSDRMPKIWINSILRLH----LTM 140
Fly 141 VLLDRYDPVERSLDLTLFYKDKALCGE--FFALAESNCMSTVLGIVDREMPELERLILDGNHLTN 203
Fly 204 LWVFRKVERRFPRLHSISLKHNDIENIYSLRNLQFLPLAELNLLDNPL 251 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nxf4 | NP_731156.1 | leucine-rich repeat | 150..190 | CDD:275382 | 13/41 (32%) |
LRR_4 | 189..235 | CDD:289563 | 14/45 (31%) | ||
leucine-rich repeat | 191..216 | CDD:275382 | 6/24 (25%) | ||
leucine-rich repeat | 217..240 | CDD:275382 | 5/22 (23%) | ||
nxf1a | XP_009306018.1 | Tap-RNA_bind | 142..223 | CDD:286271 | 18/101 (18%) |
leucine-rich repeat | 249..291 | CDD:275382 | 13/41 (32%) | ||
LRR_4 | 290..336 | CDD:289563 | 14/45 (31%) | ||
leucine-rich repeat | 292..317 | CDD:275382 | 6/24 (25%) | ||
leucine-rich repeat | 318..341 | CDD:275382 | 5/22 (23%) | ||
leucine-rich repeat | 342..372 | CDD:275382 | 7/11 (64%) | ||
NTF2 | 413..561 | CDD:238403 | |||
TAP_C | 579..641 | CDD:197882 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3763 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |