| Sequence 1: | NP_731156.1 | Gene: | nxf4 / 40884 | FlyBaseID: | FBgn0051501 | Length: | 301 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001093156.1 | Gene: | NXF2B / 728343 | HGNCID: | 23984 | Length: | 626 | Species: | Homo sapiens |
| Alignment Length: | 197 | Identity: | 56/197 - (28%) |
|---|---|---|---|
| Similarity: | 81/197 - (41%) | Gaps: | 35/197 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 96 FFVDSYDVASALFRRGWVDNQIWLKV-SDRMPKIWI-----------------NSILRLHLTMVL 142
Fly 143 LDRYDPVERSLDLTLFYKDKALCGE--FFALAESNCMSTVLGIVDREMPELERLILDGNHLTNLW 205
Fly 206 VFRKVERRFPRLHSISLKHNDIENIYSLRNLQFLPLAELNLLDNPL------PAGYEKEVLDIWP 264
Fly 265 SL 266 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| nxf4 | NP_731156.1 | leucine-rich repeat | 150..190 | CDD:275382 | 13/41 (32%) |
| PPP1R42 | <191..276 | CDD:455733 | 23/82 (28%) | ||
| leucine-rich repeat | 191..216 | CDD:275382 | 6/24 (25%) | ||
| leucine-rich repeat | 217..240 | CDD:275382 | 4/22 (18%) | ||
| NXF2B | NP_001093156.1 | Tap-RNA_bind | 124..203 | CDD:462696 | 12/43 (28%) |
| PPP1R42 | <227..363 | CDD:455733 | 38/127 (30%) | ||
| leucine-rich repeat | 229..271 | CDD:275382 | 13/41 (32%) | ||
| LRR | <268..>332 | CDD:443914 | 19/63 (30%) | ||
| LRR 1 | 271..296 | 7/24 (29%) | |||
| leucine-rich repeat | 272..297 | CDD:275382 | 6/24 (25%) | ||
| LRR 2 | 297..320 | 4/22 (18%) | |||
| leucine-rich repeat | 298..321 | CDD:275382 | 4/22 (18%) | ||
| LRR 3 | 321..348 | 8/26 (31%) | |||
| leucine-rich repeat | 322..352 | CDD:275382 | 9/29 (31%) | ||
| LRR 4 | 349..376 | 2/5 (40%) | |||
| NTF2_like | 391..543 | CDD:471850 | |||
| TAP_C | 570..623 | CDD:197882 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||