DRSC/TRiP Functional Genomics Resources

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Protein Alignment rn and ZNF479

DIOPT Version :10

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_150376.1 Gene:ZNF479 / 90827 HGNCID:23258 Length:524 Species:Homo sapiens


Alignment Length:207 Identity:77/207 - (37%)
Similarity:109/207 - (52%) Gaps:9/207 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 QPINASKMGGPGGVSSVAGGHATGGGSGRKYQCKMCPQIFSSKADLQLHTQIHMREAKPYKCTQC 522
            :|....:.|....|||....|.......:..:|:.|.:.||..::|..|.:||.|| |||.|.:|
Human   295 RPYKCEECGKAFSVSSTLTDHKRIHTGEKPCRCEECGKAFSWSSNLTRHKRIHTRE-KPYACEEC 358

  Fly   523 SKAFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHPGCQKAFSQL 587
            .:||:.||.|.:|.|||.|.|||.||.|.:.|.:.|.|..|.|.|||::||||..  |.|.||..
Human   359 GQAFSLSSNLMRHRRIHTGEKPYTCEECGQDFRRSSALTIHKRIHTGERPYKCEE--CGKVFSLS 421

  Fly   588 SNLQSHSRCHQTDKPFKCNSCYKCFSDEPSLLEHIPKHKESKHLKTHICQYCGKSYTQETYLTKH 652
            |.|..|.|.|..::|:||..|.|.||...:|.:|...|...   :.:.|:.|||::...:.|.:|
Human   422 STLTDHKRIHTGERPYKCEECGKAFSLSSTLTDHKRIHTGE---RPYTCEECGKAFNCSSTLMQH 483

  Fly   653 MQKHAERTDKRP 664
            .:.|   |.::|
Human   484 KRIH---TGEKP 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368 6/19 (32%)
C2H2 Zn finger 519..539 CDD:275368 9/19 (47%)
COG5048 543..>647 CDD:227381 41/103 (40%)
C2H2 Zn finger 547..567 CDD:275368 8/19 (42%)
zf-H2C2_2 559..586 CDD:463886 13/26 (50%)
C2H2 Zn finger 575..597 CDD:275368 9/21 (43%)
C2H2 Zn finger 605..625 CDD:275368 7/19 (37%)
C2H2 Zn finger 636..656 CDD:275368 6/19 (32%)
ZNF479NP_150376.1 KRAB 16..76 CDD:214630
COG5048 <170..372 CDD:227381 26/77 (34%)
C2H2 Zn finger 187..207 CDD:275368
C2H2 Zn finger 215..235 CDD:275368
C2H2 Zn finger 243..263 CDD:275368
C2H2 Zn finger 271..291 CDD:275368
C2H2 Zn finger 299..319 CDD:275368 5/19 (26%)
COG5048 <323..479 CDD:227381 66/161 (41%)
C2H2 Zn finger 327..347 CDD:275368 6/19 (32%)
C2H2 Zn finger 355..375 CDD:275368 9/19 (47%)
C2H2 Zn finger 383..403 CDD:275368 8/19 (42%)
C2H2 Zn finger 411..431 CDD:275368 9/21 (43%)
C2H2 Zn finger 439..459 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..487 CDD:275368 6/19 (32%)
zf-H2C2_2 480..503 CDD:463886 5/16 (31%)
C2H2 Zn finger 495..515 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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