DRSC/TRiP Functional Genomics Resources

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Protein Alignment rn and ZKSCAN8

DIOPT Version :9

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001265048.1 Gene:ZKSCAN8 / 7745 HGNCID:12983 Length:578 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368
C2H2 Zn finger 519..539 CDD:275368
zf-H2C2_2 531..556 CDD:290200
zf-C2H2 545..567 CDD:278523
C2H2 Zn finger 547..567 CDD:275368
zf-C2H2_8 550..630 CDD:292531
zf-H2C2_2 559..586 CDD:290200
C2H2 Zn finger 575..597 CDD:275368
C2H2 Zn finger 605..625 CDD:275368
C2H2 Zn finger 636..656 CDD:275368
ZKSCAN8NP_001265048.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
SCAN 47..159 CDD:128708
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..205
KRAB_A-box 221..>262 CDD:322003
COG5048 <315..564 CDD:227381
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 380..400 CDD:275368
C2H2 Zn finger 408..428 CDD:275368
C2H2 Zn finger 436..456 CDD:275368
C2H2 Zn finger 464..484 CDD:275368
C2H2 Zn finger 492..512 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 548..568 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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