DRSC/TRiP Functional Genomics Resources

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Protein Alignment rn and Zfp422

DIOPT Version :10

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_080333.1 Gene:Zfp422 / 67255 MGIID:1914505 Length:237 Species:Mus musculus


Alignment Length:208 Identity:80/208 - (38%)
Similarity:105/208 - (50%) Gaps:40/208 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   464 KMGGP-GGVS-SVAGGHA--------------------TGGGSGRK-------YQCKMCPQIFSS 499
            ::|.| ||:| |.:.|.|                    ..|.|.|:       |:|..|.:.||.
Mouse     2 RLGKPKGGISRSASQGKAYESKRKTARQRQKWGVAIRFDSGLSRRRRNVDEKPYKCAKCSKSFSQ 66

  Fly   500 KADLQLHTQIHMREAKPYKCTQCSKAFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLSHLQQHI 564
            .:.|..|.:||..: |.:||..|.|:|..||.|.||.|||.|.|||:|:.|..:|.|.|:|.||.
Mouse    67 SSTLFQHKKIHTGK-KSHKCADCGKSFFQSSNLIQHRRIHTGEKPYKCDECGERFKQSSNLIQHQ 130

  Fly   565 RTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEPSLLEHIPKHKESK 629
            |.|||:|||.|..  |.:.|||.|:|..|.|.|..:||::|..|.||||....|.:|:..|||.|
Mouse   131 RIHTGEKPYCCDE--CGRCFSQSSHLIQHQRTHTGEKPYQCEECDKCFSQSSHLRQHMKVHKEKK 193

  Fly   630 --------HLKTH 634
                    .:|||
Mouse   194 PHKRGKNARVKTH 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368 6/19 (32%)
C2H2 Zn finger 519..539 CDD:275368 10/19 (53%)
COG5048 543..>647 CDD:227381 45/100 (45%)
C2H2 Zn finger 547..567 CDD:275368 9/19 (47%)
zf-H2C2_2 559..586 CDD:463886 13/26 (50%)
C2H2 Zn finger 575..597 CDD:275368 9/21 (43%)
C2H2 Zn finger 605..625 CDD:275368 8/19 (42%)
C2H2 Zn finger 636..656 CDD:275368
Zfp422NP_080333.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 8/31 (26%)
COG5048 <53..195 CDD:227381 66/144 (46%)
C2H2 Zn finger 57..77 CDD:275368 6/19 (32%)
C2H2 Zn finger 85..105 CDD:275368 10/19 (53%)
C2H2 Zn finger 113..133 CDD:275368 9/19 (47%)
C2H2 Zn finger 141..161 CDD:275368 9/21 (43%)
C2H2 Zn finger 169..189 CDD:275368 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..219 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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