DRSC/TRiP Functional Genomics Resources

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Protein Alignment rn and ZNF287

DIOPT Version :9

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001333096.1 Gene:ZNF287 / 57336 HGNCID:13502 Length:761 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368
C2H2 Zn finger 519..539 CDD:275368
zf-H2C2_2 531..556 CDD:290200
zf-C2H2 545..567 CDD:278523
C2H2 Zn finger 547..567 CDD:275368
zf-C2H2_8 550..630 CDD:292531
zf-H2C2_2 559..586 CDD:290200
C2H2 Zn finger 575..597 CDD:275368
C2H2 Zn finger 605..625 CDD:275368
C2H2 Zn finger 636..656 CDD:275368
ZNF287NP_001333096.1 SCAN 46..144 CDD:413396
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..154
KRAB 170..227 CDD:214630
SFP1 <364..419 CDD:227516
C2H2 Zn finger 370..390 CDD:275368
C2H2 Zn finger 398..418 CDD:275368
COG5048 422..755 CDD:227381
C2H2 Zn finger 426..446 CDD:275368
C2H2 Zn finger 454..474 CDD:275368
C2H2 Zn finger 482..502 CDD:275368
C2H2 Zn finger 510..530 CDD:275368
C2H2 Zn finger 538..558 CDD:275368
C2H2 Zn finger 566..586 CDD:275368
C2H2 Zn finger 594..614 CDD:275368
C2H2 Zn finger 622..642 CDD:275368
C2H2 Zn finger 650..670 CDD:275368
C2H2 Zn finger 678..698 CDD:275368
C2H2 Zn finger 706..726 CDD:275368
C2H2 Zn finger 734..754 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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