DRSC/TRiP Functional Genomics Resources

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Protein Alignment rn and CG14710

DIOPT Version :10

Sequence 1:NP_001262343.1 Gene:rn / 40879 FlyBaseID:FBgn0267337 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_650092.4 Gene:CG14710 / 41393 FlyBaseID:FBgn0037920 Length:415 Species:Drosophila melanogaster


Alignment Length:22 Identity:10/22 - (45%)
Similarity:15/22 - (68%) Gaps:0/22 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 GILKIRLLVLFLILVMTITCIL 126
            |::.:.|.....|||::|||||
  Fly    15 GVVAVWLCFFGAILVISITCIL 36

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnNP_001262343.1 C2H2 Zn finger 490..510 CDD:275368
C2H2 Zn finger 519..539 CDD:275368
COG5048 543..>647 CDD:227381
C2H2 Zn finger 547..567 CDD:275368
zf-H2C2_2 559..586 CDD:463886
C2H2 Zn finger 575..597 CDD:275368
C2H2 Zn finger 605..625 CDD:275368
C2H2 Zn finger 636..656 CDD:275368
CG14710NP_650092.4 zf-AD 9..84 CDD:462262 10/22 (45%)
COG5048 <261..395 CDD:227381
C2H2 Zn finger 264..284 CDD:275368
C2H2 Zn finger 292..312 CDD:275368
C2H2 Zn finger 320..340 CDD:275368
C2H2 Zn finger 348..368 CDD:275368
C2H2 Zn finger 376..395 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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